Collimonas arenae: LT85_1060
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Entry
LT85_1060 CDS
T03512
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
care
Collimonas arenae
Pathway
care00630
Glyoxylate and dicarboxylate metabolism
care00680
Methane metabolism
care01100
Metabolic pathways
care01120
Microbial metabolism in diverse environments
care01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LT85_1060
09102 Energy metabolism
00680 Methane metabolism
LT85_1060
Enzymes [BR:
care01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LT85_1060
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4_21
Fer4
Fer4_10
Fer4_6
Fer4_9
Fer4_2
Fer4_16
Fer4_8
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
AIY40218
UniProt:
A0A0A1F6A3
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All DBs
Position
1197733..1200597
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AA seq
954 aa
AA seq
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MNQLNELDYGTPAKPAGQTVTLEIDGVSVDVAAGTSVMRAAVEAGINVPKLCATDSLEPF
GSCRLCLVEIEGKKGYPASCTTPCEPGMKVRTQTPKLADIRRGVMELYISDHPLDCLTCP
TNGNCELQDMAGVTGLREVRYGYEGENHLKMKKDESNPYFTYDPSKCIVCNRCVRACEET
QGTFALTIDGRGFESRVSAGQMQDFMDSECVSCGACVQACPTATLTEKTVIMLGQAEHSA
ITTCAYCGVGCSFKAEMKGNQVVRMVPHKDGQANHGHSCVKGRFAWGYATHKDRITKPMI
RSKITDPWREVSWDEALTYAAGEFRRIQAKYGKDSIGGITSSRCTNEETYLVQKLVRAAF
GNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFDSVMQSDVIMVIGANPVAAHPVFASQM
KRRLRQGAKLIVVDPRTTDMVKSPHVQAAFHLKLRPGTNVALITALAHVILSEGLEKPDF
VAERCDQKSYADWKEFVLRPENSPEMMAAVTGVPAEQLRGAARLYATAANGAIYYGLGVT
EHAQGSTMVIGIANLAMATGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSDS
TVRGEFEQMWGVTLSPEPGLRIPNMFDAALDGSFMGLYCEGEDIVQSDPNTQHVTAAMAA
MECIVVQDLFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVMPAKAGKSDWEVT
VALSNALGYPMNYSHPSQIMDEIAALTPTFHGVSYAKLEQAGSLQWPCNEEAPQGTPIMH
IGQFVRGKGKFINTQYFATDEKVTLKFPLILTTGRILSQYNVGAQTRRTENVEWHSEDRL
EIHPHDAEDRGIKDDDWVGIESRAGQTVLRATVTERVQPGVVYTTFHFPESGANVITTDN
SDWATNCPEYKVTAVQVMPVSQPSAWQKQFSRFTEQQLKLLQGQAEQAEAAVTK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcttaacgaactcgactacggtactcccgccaaaccagccggccagacggtc
acgctggaaatcgatggcgtcagtgtcgacgtggcagccggcacttcggtcatgcgcgct
gcggtcgaagccggcatcaatgtgccaaaactatgcgccaccgacagcctcgaaccgttc
ggttcctgccgcttgtgcctggttgaaatcgaaggcaagaaagggtatcccgcttcttgc
accacaccatgcgaacccggcatgaaagtccgtacccagacgccgaagctggccgatatc
cgccgcggcgtcatggaactctacatttccgatcatccgctcgactgtctgacgtgtccc
accaacggtaactgcgagctgcaggacatggcgggcgtcaccggcctgcgcgaagtgcga
tatggctatgaaggcgaaaaccacctcaagatgaagaaggatgaatcgaatccttatttc
acctacgatccgtccaagtgcatcgtctgcaaccgctgcgtgcgcgcctgcgaagaaacc
cagggtacgtttgcgctgaccattgacggccgcgggtttgagtcgcgcgtgtcggctggg
cagatgcaggattttatggattccgaatgcgtctcctgcggtgcttgcgtgcaagcctgc
ccgaccgccaccctgactgaaaagaccgtcatcatgctaggccaggccgagcacagcgcg
atcactacttgcgcctattgcggcgtcggctgttcgttcaaggcagagatgaaaggcaac
caggtagtacgcatggtgccgcacaaggatggccaggccaatcacggccattcctgcgtc
aaggggcgtttcgcctggggctatgcgacacacaaggaccgcatcaccaagccgatgatc
cgcagcaaaattaccgatccgtggcgcgaagtttcatgggatgaagcgctgacttacgcc
gcgggtgaattccgtcgcatccaggccaagtacggcaaggattcgatcggcggcatcact
tcatcgcgttgcaccaacgaagaaacctatctggtgcagaaactggtgcgcgcggccttc
ggcaacaacaacgtcgatacttgtgcccgggtgtgccattcgccaaccggctacggcctg
aagcaaacgctgggcgaatcggcaggcacccagactttcgattcggtcatgcagtccgac
gtcatcatggtcatcggcgctaacccggtggcggcgcatccggtgttcgcttcgcaaatg
aagcgccgcctgcggcagggcgccaagctgatcgtggtcgatccgcgcaccactgacatg
gtcaagtcaccgcacgtacaggcagcctttcatctgaaactgcggccaggcaccaacgtc
gcgctgatcactgcgctggcgcacgtgattctgtcggaaggcctggaaaagccggatttt
gtggccgaacgttgcgaccagaaatcgtatgctgactggaaagaatttgtcctgcgtccg
gagaattcgccggagatgatggcggctgtcaccggcgtgccggccgagcaattgcgcggc
gccgcccgtttgtatgcgactgccgctaacggcgcaatctattacggcctcggcgtcacc
gagcatgcacaaggttcgaccatggtgatcggcatcgccaacttggcgatggcgacgggt
aacgtcggtcgcgaaggcgtcggcgtcaatccgttgcgcggtcagaacaatgtgcagggg
tcctgcgacatgggttccttcccgcatgaactaccgggttatcgccatgtttccgacagt
accgtgcgcggtgaattcgaacagatgtggggcgttacgctcagccctgaaccgggtttg
cggataccgaacatgttcgacgccgcgctcgacggcagtttcatgggcttgtactgcgaa
ggcgaagatattgtccagtcggacccgaacactcagcatgtgaccgccgccatggcggcg
atggagtgcatcgtggtgcaagatctgtttctcaatgaaactgccaagtacgcgcatgtg
ttcctgcccggttcgtcgttcctggaaaaagatggcaccttcaccaacgccgagcgtcgt
atctcgcgtgtgcgcaaggtgatgccggccaaggctggaaaatccgactgggaagtgact
gttgcgttatccaacgcgctcggttatccgatgaactacagccatccgtcccagatcatg
gacgagatcgccgcgttgacgccgactttccatggcgtcagctacgccaaactggagcag
gccggcagcctgcaatggccgtgcaacgaagaagcgccgcaaggcacgccgatcatgcac
atcggccagtttgtgcgtggcaagggtaagttcatcaatacccagtatttcgccaccgac
gagaaggtcacgctgaaattcccgctgatcctgactaccggtcgcattctgtcgcaatat
aatgtgggcgcgcagacgcgccgtaccgagaatgtcgaatggcatagcgaggaccggttg
gaaattcatccgcacgatgccgaggaccgcggtatcaaagacgatgactgggtcggaatt
gaatcgcgcgccgggcagactgtgttgcgggcgacggtcaccgagcgggtgcagccgggt
gtggtttacactaccttccacttcccggaatcgggcgccaacgtgattactaccgataat
tcggactgggcgaccaattgcccggaatacaaagtcaccgcggtgcaggtcatgccggtt
agccagccgtccgcatggcagaagcagttcagccgtttcaccgagcagcaattgaagttg
ttgcaaggacaggccgaacaggcggaggcggcggtcaccaaataa
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