Collimonas arenae: LT85_1164
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Entry
LT85_1164 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_1164
Transporters [BR:
care02000
]
Other transporters
Pores ion channels [TC:
1
]
LT85_1164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIG
Peptidase_M66
Reprolysin_5
Reprolysin_2
Reprolysin_3
Motif
Other DBs
NCBI-ProteinID:
AIY40322
UniProt:
A0A0A1FBW0
LinkDB
All DBs
Position
complement(1305276..1308041)
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AA seq
921 aa
AA seq
DB search
MLSQSGCGGGGGSSDNSAPAPNSIAAPTPAAAVSISALSASSASAGAIVNLTGTGFQKVT
AVSIGGVAVTFSIVSDSQIAMTIPATAVSGVITLSGPGFSVQSTATFVSSLPAPLVTSVS
SSNIAVGTNFTIQGQNLNRISAYQIAGVNLTVVNSSSTTATLTMPTQAISGTLTLIVNSA
PVNTSYQLYGYVPASIVAILPQSGVIGSNVTINGSGLAAVKNIRFANGTVASVTTASNSA
VTFVVPPGAASGTLIAVDPHQEVISASAFSVVPTVTATALQSVSNNGTVVLTVTGTNLNT
VTSATVGSVTAAIVSSSTTQLVLSVALGSSGTLTLTAPGQAGINAGTIDNTGNVGLWISN
VDFVHVFDKSSTDLTLRLTPGRPALVRATVLAPAAGAKSPVVNLSATSTTGVALGTLAMN
GPANLPTAKDDYNLNSTFNAVLPAAWVQPGVKVSIKIAASANNSPASQDVSPVVGAPTSI
RVVLVPLTVGSATGVLPQNLSDVQKALARVYPYANGNIKVQSRLPLTITGATTTTSMSWG
TTLSQLESTREAEDPNAFYYGFVPMYTPIPSSFIAGLGYVGNRAQGNSSAVAAIGLDWTS
SAGQGDPFNNNWPQWQAIMVHEMGHNHSLSHAPCGGAGNPDPAFPNTNADLSSLAVYNSL
YDSDTQVGTLSSPLTPSNTQMKDVMGYCGGTWFSDFSYVRAQQFAESRTAAIPQPLVLNA
AADVATAPDGYLTIAGEITAQGVLLHPASASATKLRIDTATAKSTYAVRLRTVSGQTYTL
PFEPVSVADTTDKTSHFWVSLPNPGEIATIDVLNNGQVQTLRQPGQVQRAKAASTTAGNA
QAMASSVGWNVQNGKLNVTWNAALEPFLSLMYISPSGAKTVLGNGLQNGSATFDIKSLPS
GGRFDLSLSSAMQARLVSFPH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccagtccggttgcggcggcggaggcggatcaagcgacaactcagcgcctgcg
ccaaactcgattgccgctccaactccggcggcagctgtcagtatttcagcactgtcagct
tcgagcgcatccgccggtgctatcgtcaatctcactggtacaggctttcaaaaagtaacc
gcagtcagcatcggcggcgttgccgtcacgttttctatcgttagcgacagccagatcgca
atgacgattccggccacggcagtcagtggtgtgattaccctatccggcccgggattctcg
gtgcaatcgactgcgacatttgtttccagcctgccggcaccgctggttacaagcgtatcc
tccagcaacatcgctgtcggaaccaatttcacgatccagggccagaacctgaaccggatc
agcgcctatcagatcgccggcgtcaatctgaccgtcgtcaacagctccagcaccacggcg
accctgaccatgccgacgcaggcaatttccggtacgctgacgctgatcgtgaacagtgcg
ccagtgaatacctcctatcagctttacggctatgtgccggcatcgattgttgcgatactg
ccgcaaagcggcgtcatcggcagcaacgtcacaatcaacggtagcggcttggctgcggtc
aagaatatccgctttgctaacggcaccgttgcttctgtaaccactgcttccaacagcgcc
gtcacattcgtcgtaccgcctggtgcggcttcgggcaccctgattgctgtcgatccccat
caggaagtgatcagcgccagtgccttttcagttgtcccgacggtcacggcgaccgctcta
cagagcgtcagcaacaacggcaccgtggtgttaaccgttaccggcaccaacctgaacact
gtcaccagcgccaccgtcggcagtgtgaccgccgccatcgtcagcagcagcactacacaa
ctggtgttgagcgtagccctgggaagcagcggcacgctgacattgaccgcacccggccag
gcaggcatcaatgccggcacaatcgacaacaccgggaatgtgggcttgtggattagcaac
gtcgactttgtacatgtattcgataaaagttctaccgacctgacgctgcgcctcacacca
ggccggcctgcccttgtacgtgcaaccgtactggcacccgccgccggtgctaaaagtccg
gtagtaaatttgtcggctaccagcacaactggcgtcgcacttggtacgctggcgatgaac
ggccctgccaatctgcctactgcaaaagacgactacaacctgaacagtactttcaacgcc
gtactgcctgcggcctgggtgcaaccgggcgtcaaggtcagcatcaagatagcagccagc
gccaacaatagcccggccagccaagacgtttcgccggtggttggcgcgccgaccagcata
cgcgtagtgctggtgccattgacagttggtagcgccacaggggtattgccacagaatctg
tccgatgtgcagaaagcgctggcccgtgtctatccttacgcaaacggcaatatcaaagta
caaagccgcctgcctctcactatcacaggcgcaacgactaccacttccatgagttgggga
acgacattaagccagctggaaagcacccgtgaagccgaagacccgaacgccttctattac
ggctttgttcccatgtacacgccgataccgtcgtcatttatcgccggcctgggttatgtc
ggaaaccgggcgcaagggaacagttctgcggtcgctgcgatcggcctggactggaccagc
agcgccggccaaggcgatccgttcaacaataactggccgcaatggcaggccatcatggtg
catgaaatgggccacaaccattccctgagccatgcaccttgcggcggcgcagggaatcca
gatccagccttccccaacaccaacgccgacttgagctcgctggctgtctacaatagcttg
tacgacagcgacacccaggtaggtacactgagctcgccgcttacaccaagcaacacgcaa
atgaaagatgtcatgggttattgcggcggtacctggttctctgatttcagctatgtccgg
gcgcaacagtttgccgaatcccgtactgcagcgattccacaacctctcgtattgaatgct
gctgcagatgtcgcgaccgccccggacggctatctgaccatcgccggcgagatcactgcg
caaggcgtgctgttgcatccggcttccgcttcagccactaaattgcgcatcgatacagcc
accgccaaatcgacctatgctgtgcgcttgcgcacggtatccggccagacctataccttg
ccgtttgaaccggtcagcgttgccgatacgactgataaaaccagccacttctgggtcagc
ctgcccaatcccggagaaatcgccacgatcgatgtgctgaataacggacaagtgcaaaca
ctgcgccagccgggtcaggtacaacgtgcgaaagcagcgagcactaccgcgggcaatgcc
caggcaatggcgtcatcggtgggctggaacgtccagaacggtaaattgaacgtcacctgg
aacgctgcgctggaaccgttcttgtcattgatgtacatctccccaagcggcgccaaaacc
gtactcggcaatggcctgcaaaacggtagcgcgacatttgatatcaagagcctgccaagc
ggcggccgttttgacctgagcctgtcttcagcaatgcaggcgcgcctggtcagcttccct
cactga
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