Collimonas arenae: LT85_1184
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Entry
LT85_1184 CDS
T03512
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
care
Collimonas arenae
Pathway
care02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT85_1184 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_1184 (msbA)
Enzymes [BR:
care01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LT85_1184 (msbA)
Transporters [BR:
care02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LT85_1184 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
CoA_binding_3
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AIY40342
UniProt:
A0A0A1FBX1
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All DBs
Position
1332215..1333972
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AA seq
585 aa
AA seq
DB search
MNVYSYTTIFKRLAALHKPYKKRLVLGLLGMVVTAATEPLVAYIFKILLDKGFVQKQTFP
IWVVPLAVIGAFVARGASTFLTTYMTNWVSTRVLTTLRQQMFNRILNVSIDFHATHTVGR
VINSIMFEVQQIIEMISKLFTSIVRCALTVAGLMGYMLFISWKLTIVALVLMPLMMLVVR
TTAKRLKKLNKDSLDVNAQLTQVIEETTRAQQVIKVFGGEDYERKRFAESAEEIRRYSMR
MTSTFAATVPVTQIMMACAMSVMITMGLVQASHGQLTAGDFISFLAAMIALQVPLKQLAE
VNGPLQRGMAAAEAVFKLIDSRVERSGGIQLEKRAMGKIEFSNVGFSYPGQERPALKNIN
LDVKPGETIAFVGMSGGGKSTLVNLIPGFYSATEGRILLDDLPIESIALDSLRAQIAMVS
QNVVLFNDTIAANIAYGDKAPSQERIEAAAKAAHLAEMITSLPESYATQVGDNGSRLSGG
QRQRLAMARAIYKDAPILILDEATSALDTESERAVQAALDQLMQGRTTFVIAHRLSTIER
ASRIAVLSNGSIVEIGTHQELLSKQGAYANLYHLQFSKGAVNVEM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtatattcctatacaacgatcttcaagcggcttgcagctttgcacaagccgtac
aagaagcgcctggtgctgggccttctggggatggtagtgaccgcggcaaccgagccgctg
gttgcctacatcttcaagatcctgctggacaagggctttgttcaaaagcagacctttccg
atatgggtggtgccgctagccgtgatcggcgcattcgtcgcgcgcggcgcgtcgactttc
ctgaccacctatatgaccaactgggtatctacccgggtgctgacaacgttgcgccagcag
atgttcaatcgcatcttgaatgtctcgattgatttccatgccacccatacggtaggccgc
gtgatcaattcgatcatgtttgaggtacagcaaatcattgaaatgatcagcaagctgttc
acctcgatcgtacgctgcgctcttactgttgcgggtttgatgggttacatgctgttcatc
agctggaaactgacgatagtcgcacttgtcttgatgcctctgatgatgctggtggtgcgc
accaccgccaagcgcctgaagaagctcaacaaggattcgctcgacgtcaacgcccagcta
acacaggtgattgaagaaaccacccgcgcccagcaagtgatcaaggtgttcggcggcgag
gactacgagcgtaagcgctttgcggagtccgccgaagagatacgccgctacagcatgcgc
atgaccagcacctttgccgccaccgtgccggtcacgcaaatcatgatggcttgcgcaatg
tcggtgatgatcacgatgggtctggtccaagccagtcatggccagcttaccgccggcgat
ttcatttcgttcctggcagcgatgattgctctgcaggtgccgctcaagcaactggctgaa
gtgaatggcccgttgcagcgcggaatggcagcggcggaagcggtattcaaactgatcgac
agtcgggtcgaacgtagcggcggtatccagctggagaagcgagcgatggggaaaattgaa
ttctccaatgtcggcttttcctatcccggccaggaaagacctgccttgaagaacatcaac
ctggacgtcaagccgggcgaaaccatcgctttcgttggcatgtcgggtggcggtaaatca
actctggtcaacctgattccgggtttctattcggccaccgaaggccgtattttgctggac
gacttgccgatcgaaagcatcgcgctggacagcttgcgggcgcagatagccatggtgagc
cagaatgtcgtgctgttcaacgacacgatcgccgccaatatcgcctatggcgacaaggcc
cctagccaggaacggattgaagctgcggcgaaggctgcgcatctggcagagatgattact
tctttaccggaaagctacgccacccaggttggcgacaatggttcgcgcctgtcaggcggc
cagcgccagaggctggcgatggcgcgcgccatctacaaggatgcaccgatcttgattctg
gatgaagccacttcggcgctcgacactgagtccgaacgcgcggtgcaggcagcgctggac
caactgatgcagggccgcacaacgtttgtgatcgcccatcgactgtcaaccattgagcgc
gccagccgtatcgccgtgctgtcgaacggcagtatcgtggagatcgggactcaccaggag
ttgctgagcaagcagggggcctatgcgaatttgtatcatctccagttttccaagggagcg
gtgaacgtcgagatgtaa
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