Collimonas arenae: LT85_1197
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Entry
LT85_1197 CDS
T03512
Name
(GenBank) ATPase component BioM of energizing module of biotin ECF transporter
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1197
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LT85_1197
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA
ResIII
AAA_30
SLFN-g3_helicase
AAA_16
TrwB_AAD_bind
T2SSE
CbiA
AAA_10
AAA_19
FtsK_SpoIIIE
AAA_28
AAA_6
NACHT
Hydrolase
AAA_25
nSTAND3
NTPase_1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AIY40355
UniProt:
A0A0A1F9A6
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Position
1344560..1346014
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AA seq
484 aa
AA seq
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MLLPALVNRHGCITGATGTGKTVTLQVIAQALSDRGVPVFMADVKGDLSGMAKAGASSGK
LKQRLEALGIEEPQWAATPVTFWDVYGQQGHPVRATISDMGPLLLARMLNLNDTQQGVLQ
LVFKIADDNGLLLLDLKDLRAMLQHVGDNAASFQTEYGNISAASIGAIQRGLIGIGEQGG
EQFFGEPMLNIDDLIQTDGSGKGVVNILAADKLMNAPRLYSTFLLWMLSELFEHLPEVGD
LDQPKLVFFFDEAHLLFSEAPKPLLQKIEQVVRLIRSKGVGVFFVTQNPLDIPDTVLGQL
GNRVQHALRAYTPRDQKAVQAAADTFRANPALNTAEVIGELGVGEALVSFLDEKGRPTIV
ERAFILPPASQIGPITDEERKQLMATSIVAGVYEAAVDRESAYEILKGRSATPAAKDGAQ
AGTDSSIGATVSSWGSALGGLLGGGSGHKDSVVQAVVKSAARTIGSQVGRELIRGVLGSL
LKKK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctgcccgcattagtgaatcgccatggctgcattaccggcgccaccggcaccggt
aagaccgtcaccttgcaagtgattgcacaggctttgtcggatcgcggcgtaccggttttc
atggccgacgtcaagggtgatttgtccggcatggctaaggctggagcctcttcgggtaag
ttgaagcagcggctggaggcgctgggaatcgaagagccgcagtgggcggcgacgccggtc
actttctgggatgtgtatggccaacagggccatccggtgcgcgctacgatctccgacatg
gggccgttgctgttggcgcgtatgctgaatctgaacgatacccagcaaggcgtgttgcag
ctggtgttcaagatcgccgacgacaacggcctgctgttgctggacctgaaggatttgcgg
gcgatgttgcaacacgtcggtgacaatgctgccagtttccagaccgaatacggcaatatt
tccgccgccagcatcggcgctatccagcgcggcctgatcggcattggcgagcaaggcggc
gaacagttcttcggcgagccgatgctcaatatcgacgacctgatccagaccgatggcagt
ggcaagggtgtggtgaatattctggcggctgacaagctgatgaacgcgccgcgcctgtat
tccacctttttgctgtggatgctgtcggaactgtttgaacatttacccgaagtgggcgac
ctggaccagccgaagctggtgtttttctttgacgaagcacatttgctgttcagcgaagcg
cccaagcccttgctgcagaaaatcgagcaagtggtgaggttgatccgttccaaaggtgtt
ggcgtattcttcgtcacgcaaaatccgctggatattcccgataccgtgctgggccagttg
ggtaatcgcgtgcagcatgcgctgcgcgcctatacgccgcgcgatcaaaaagccgtgcaa
gccgccgccgataccttccgcgccaatccggccttgaacacggcagaagtcatcggcgaa
cttggcgtcggcgaagcactggtgtccttccttgacgagaagggacgtccgactatcgtc
gagcgtgcattcatcctgccgccggcatcgcagatcggaccgatcacagatgaagagcgc
aagcaactgatggcgacatcgattgtcgccggcgtgtatgaggccgcagtggatcgcgaa
tcggcatacgaaatattgaagggacgcagcgctacgccagcagccaaagatggcgcgcaa
gccggtacggattcgtcgattggggccactgtcagttcgtggggcagcgcgttgggcggc
ttgctgggcggcggttcggggcataaagacagcgtggtacaggcagtggtcaagtccgct
gcgcgcaccatcggttctcaggttggacgcgaattgattcgcggcgtgctgggatctttg
ctgaaaaaaaagtaa
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