Collimonas arenae: LT85_1259
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Entry
LT85_1259 CDS
T03512
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
care
Collimonas arenae
Pathway
care03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LT85_1259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1259
Enzymes [BR:
care01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LT85_1259
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LT85_1259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AIY40417
UniProt:
A0A0A1FC35
LinkDB
All DBs
Position
complement(1410377..1411054)
Genome browser
AA seq
225 aa
AA seq
DB search
MKSAKIAADISQAAYRKAEIFLSALDHDWARHIASIGPCLHAAKPAREPYQALVRAIAYQ
QLHVRAGDAILGRMLALYGDNGESNFPTARQLLDTDVATLRGCGFSASKIATIHGIAQAA
LDGVVPLRKEALAMSDAALIERLVTLRGVGQWTVEMLLIYTLERSDILPADDFGVREGYR
RLKNLAQTPTRKQIGEIGLAWSPYRTVASWYLWRLPKTPAANEVI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgcgaagattgccgcggatatttcccaagccgcttatcgcaaggctgagatt
ttcctgtcggcactggatcatgactgggcgcgtcacatcgcaagcatcggcccctgcctg
catgccgccaaaccggcccgcgagccgtatcaggcgctggtgcgcgccatcgcctatcaa
caattgcacgtacgcgccggcgacgccatcctgggccgtatgctggcattgtatggggac
aatggcgaaagcaattttccgacagcacggcaattgctcgataccgacgtcgccacgctg
cgtggttgcggcttttcggccagcaagatcgccaccattcacggcattgcgcaagcggcg
ctggacggcgtggttcccttgcgcaaagaagcgctggccatgagcgatgcggcgctgatc
gaacggctggtgacgctgcgcggcgtcggccagtggactgtcgagatgctgctgatttat
acgctggaacgttcagacatcttgccggccgacgatttcggcgtacgcgaaggttatcgt
cgcttgaagaacctggcgcagacgccaactagaaaacagatcggtgaaatcggcctggcc
tggagcccctatcgcacggtggcctcctggtatctgtggcgcttgccgaagacgcctgcc
gccaatgaagttatttga
DBGET
integrated database retrieval system
