Collimonas arenae: LT85_1413
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Entry
LT85_1413 CDS
T03512
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
care
Collimonas arenae
Pathway
care03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LT85_1413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1413
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LT85_1413
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LT85_1413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
Adeno_E4
Motif
Other DBs
NCBI-ProteinID:
AIY40571
UniProt:
A0A0A1F7R2
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All DBs
Position
1570492..1572573
Genome browser
AA seq
693 aa
AA seq
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MADISQVSSTVDESKIVTFPNSPYKLFQPFEPAGDQPAAIAKLAEGVEDGLFYQTLLGVT
GSGKTYTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL
RAKDKVSQRDVIARLIQMQYTRNEIDFGRGTFRVRGDTIDVFPAEHAELAVRIEMFDDEI
DSLQLFDPLTGRVRQKIPRFTVYPGSHYVTPRATVLRAIDTIKEELRDRLEFFRKENKLI
EEQRIEQRTRFDLEMMQEIGFTKGIENYSRHLSGAKAGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLRFDEFEGKMRQTIFVSATPADYEN
QHADQVVEQVVRPTGLIDPAIEVRPALSQVDDLMSEANARIKKNERVLVTTLTKRMAEQL
TEFLSDNGIKVRYLHSDIETVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRSERSLIQTIGRAARNLNGTAILYADRMTDSMRRAIDETERRRNKQIAFNTAN
GITPVGISKQIKELIDGVYSPQEAREELHAAQDQAKYEAMSEKQVSKEIKRLEKLMVDHA
KNLEFEKAAQVRDQLHVLKQQLFGAPGADSIAI
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatatcacaggtttccagtaccgtcgacgagtctaaaatcgtcacttttccc
aattcgccctataagctgtttcagccgttcgagccggccggcgaccagcctgcggccatc
gccaagttggctgagggcgtggaagatggcttgttttaccagactttgctgggggtgacc
ggctcgggcaagacttatacgatggctaacgtcatcgcccgcatggggcggccggcgatc
gtgtttgcgccgaataaaaccctggcggcccagctgtacagcgagtttcgcgagtttttc
ccgcataacgcggtggagtatttcgtcagttactacgattactaccagcctgaagcgtat
gtgccgcagcgcgacttgttcattgagaaagattcgtcgatcaacgagcatatcgagcag
atgcgcctgtcttgcaccaagtcgctgatggagcggcgcgacgtggttattgtggcaacg
gtgtcggcgatctacggtatcggtaatcccaatgagtaccatcagatgatcctgaccttg
cgcgccaaggacaaggtcagccagcgcgatgtgatcgcacgcttgatccagatgcaatac
acgcgcaatgaaatcgatttcggccgtggcaccttccgtgtgcgcggcgatacgatcgac
gtgtttcctgcagagcatgccgaactggctgtgcgtatcgagatgtttgacgatgagatc
gacagcctgcagctgttcgatccgctgaccggccgcgtacggcagaaaattccgcgcttt
acggtctatcccggttcgcactacgtgacgccgcgcgccacggtgctgcgcgccatcgat
accatcaaggaagagttgcgcgaccggttggagtttttccgtaaggaaaataaattgatc
gaagaacagcgcattgagcagcgcacccgtttcgatctggaaatgatgcaggaaatcggc
ttcaccaagggcatcgaaaactattcacgccatctgagcggcgccaaggcgggcgaaccg
ccgccgacattggtcgattatttgccgccggatgcgctgatgttcctggatgaatcgcac
gtgctgatcggccagttgaacggcatgtacaacggcgaccgtgcgcgtaaggtgaatctg
gtggattacggtttccggctgccgtcggcgctggataaccggccgctgcgtttcgatgaa
ttcgaaggcaagatgcggcagacgattttcgtatcggcgacgccggccgattatgaaaac
cagcatgccgaccaagtggtggagcaggtggtgcggccgacggggctgatcgatccggcg
attgaagtgcgaccagccttgagccaggtggatgacctgatgtccgaggcgaatgcgcgc
atcaagaaaaacgagcgcgtgctggtcaccacactgaccaaacgcatggcggaacagctg
accgaattcctcagcgataacggcatcaaggtgcgttatttgcacagtgatatcgaaacc
gtcgaacgggttgaaatcatccgcgatctgcgtctgggaacgtttgacgtgctggtcggg
atcaacctgctgcgtgagggtttggatattcccgaggtgtcgctggtagcgatcctggat
gcggacaaggaaggcttcctgcgttccgagcgcagcctgattcaaaccatcggccgtgcc
gcgcgtaacctgaacggcaccgcgatcctgtatgccgaccgcatgaccgattccatgcgc
cgtgcaatcgacgagaccgagcgccgccgcaacaagcagatcgctttcaataccgcgaat
ggcatcacgccggtcggcatcagcaagcagatcaaggagttgatcgacggcgtctacagc
ccgcaagaagcgcgtgaggagttacatgcggcgcaggaccaggccaagtacgaggcgatg
agcgagaagcaggtcagcaaggaaatcaagcgcctggaaaaattgatggtcgatcacgcc
aagaacctggaattcgaaaaagccgcgcaggtgcgcgatcagttgcatgtgctgaagcag
cagttgtttggtgcgcctggagcggacagtatcgctatttaa
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