Collimonas arenae: LT85_1415
Help
Entry
LT85_1415 CDS
T03512
Name
(GenBank) Transcriptional regulator
Organism
care
Collimonas arenae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_11
TetR_C_13
LcrG
EthR_C
TetR_C_43
NMB0537_N
HTH_Tnp_1_2
TetR_C_37
Motif
Other DBs
NCBI-ProteinID:
AIY40573
UniProt:
A0A0A1F767
LinkDB
All DBs
Position
complement(1573466..1574227)
Genome browser
AA seq
253 aa
AA seq
DB search
MAIRKSKTPQSPTQRADQKRVDILKSAGKCFRKNGFHQTSMQEICTEVGLGPGAVYRYFT
SKDAIIAAMAEDERRQARTMLSEFHDTDDLPQALSAITRAFADRYAAISDAGLMTEIYAE
GLRNKRVGAVIKKAETEWVDGLADMLRTAQERGQIDAALNAQQAALLLTAMWDGIVIRQA
YTQEVPEAMMNLFDDMLKRWLSTAAVSTKRVKPAPAPKPVIAAPEFDFAPEPEPAAEKTP
TQAETDLRQMSLI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccatccgcaaatccaagacaccgcaatcaccgacacagagagccgaccagaaacgc
gtcgacatcctgaagtccgccggcaagtgcttccgcaagaacggctttcaccagacctcg
atgcaggagatctgcaccgaagtgggcctgggaccgggcgcggtgtatcgctatttcacc
agcaaggacgccatcatcgcggccatggccgaggatgaacgccgccaggcgcgcaccatg
ttgtcggagtttcatgacaccgacgacctgccgcaagccttgtctgccatcacccgcgcc
ttcgctgatcgctacgctgcgatcagcgatgccggcctgatgacggaaatctatgcagag
ggattgcgcaacaagcgggttggcgcggtcatcaagaaggcggagacggaatgggtggac
ggcctggcagacatgctgcgcaccgcccaggaacgcggccagatcgatgctgcgctgaat
gcccagcaagcagcgctgttgctgaccgcaatgtgggatggcatcgtgatccgccaggcc
tacacgcaagaagtgccggaagccatgatgaacttgtttgacgacatgctgaagcgctgg
ctgtcgaccgcagcggtgagcaccaagcgcgtcaagccggcgccagcgccgaagccggtt
atagccgcaccggaattcgactttgcgccggaaccagagcctgccgcggaaaagaccccg
acgcaagccgagaccgacctgcggcagatgagcctgatctaa
DBGET
integrated database retrieval system
