Collimonas arenae: LT85_1453
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Entry
LT85_1453 CDS
T03512
Name
(GenBank) Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_1453
Transcription factors [BR:
care03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LT85_1453
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GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AIY40611
UniProt:
A0A0A1F7V8
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Position
complement(1612970..1613989)
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AA seq
339 aa
AA seq
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MSKSTSTSFTHFAFIPLNNFTMLAFSNAIEVLRMANYLEGKTMYRWSIISPEGGPVAASN
GLSVTTVRADQCAAVDAAFVCGGTEIAAAINTATLDLLKHLAMQGITLGSLCTGALALAE
AGLLDGYTCATHWENLSAMKRSYPSIAFAPDLFVVDRDRITCTGGIAPLDMMLNLISGQV
GKTTIAAIADQFILEHVRDHKDQQRVPLTVRMTSARPAMVEVVSLMEANIEEPLSLDELA
QLSNSSPRQLQRMFKEHMGMSPTHYYLTLRLRKARELLRQTDMSILSITVACGFQSACHF
SKTYREIFNVAPSTERRQQAPVPAALLAAQTHQPAAFIS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagcacttctacttccttcacccactttgctttcataccgctcaacaatttt
acgatgctggcgttttcaaacgccatcgaagtactgagaatggccaactatctcgaagga
aaaacgatgtatcgctggtcgatcattagccccgaaggcgggccagtggctgccagcaat
ggtctttccgtcaccaccgtgcgcgccgaccaatgtgcagcggtcgatgccgcattcgtt
tgcggcggcaccgagattgcagccgccatcaacaccgctacgctggatttactaaagcat
ctggcaatgcagggaatcacgctgggtagtttatgcaccggcgctttggcgctggccgag
gctggcctgctggatggctatacctgcgccacgcactgggaaaacttgtccgcgatgaag
cgttcctatccgtcgattgccttcgctcccgacctgtttgtcgtggaccgcgatcgcatc
acctgcaccggcggcattgcgccgctggatatgatgctgaacctgatttcaggccaggtt
gggaaaaccacgattgcggcgattgccgatcagttcatcctggagcacgtgcgcgatcac
aaggatcagcaacgcgtgccgttgacagtgcgcatgacgtctgcccgtccggccatggtg
gaagtggtgtcgctgatggaagcgaatatagaagaaccgctgtcgctggatgagctggcg
cagttgtcgaactcctcgccacgccagctgcagcgcatgttcaaggaacacatgggcatg
tcgcccacccattactacctgacgctgcgtttgcgcaaagccagagaattgctgcgccag
accgacatgtcgatactcagcatcacggtcgcctgcggcttccagtcggcctgccatttc
agtaaaacctatcgcgagattttcaacgtggcgccgagcacggaacgccgccagcaagca
ccggtgccggctgcgctgctagcggctcaaacgcatcaacctgcggctttcatttcgtag
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