Collimonas arenae: LT85_1485
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Entry
LT85_1485 CDS
T03512
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
care
Collimonas arenae
Pathway
care00260
Glycine, serine and threonine metabolism
care01100
Metabolic pathways
Module
care_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LT85_1485
Enzymes [BR:
care01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
LT85_1485
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
LT85_1485
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
Thi4
HI0933_like
GIDA
FAD_binding_2
DAO
FAD_binding_3
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AIY40643
UniProt:
A0A0A1F7D8
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Position
1647145..1650150
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AA seq
1001 aa
AA seq
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MSQNHRLGSGGRIDRGVPLTFTFNGKRYDGFQGDTLASALLANGVHFVARSWKYHRPRGI
VTAGVEEPNALVQLEAGAYTVPNARATEIELYHGLSATSVNASPSIENDRMAVNQLFARF
IPAGFYYKTFKWPRSWWGKYEEVIREAAGFGKAPTELDPDRYEKTYAHCDVLIAGAGPAG
LAAAWVAANSGARVMLVDDQSELGGSLLSGPAVIDGLPAAAWVSKISADLRALPEVTILS
RSTAFGYQDHNLVTITQRLSEHLPLAQRRGNKVRERLWKVRAKHVILATGAHERPIVFGN
NDLPGIMLASAVSTYIHRYGVLPGRKAVVFANNDDAYQTALDLKSNGAEVTVVDPRAASN
SSLPAAAKRQGVHIINDAVVVAASGSRHVKAVEVAHHRDGVPGQFITSLDCDLLGVSGGW
NPVIHLFAQSGGKAHWNNDKACFVPGSAMQKETSAGAANGDFSLSGALRDGALAAQQAIV
SAGLKPVELPNWKVAELSEAPIMPLWLVGERKHVGRGPKQFVDYQNDVSAADIYLAAREG
YHSVEHVKRYTALGFGTDQGKLGNINGMAILAEVLGKSIPETGTTTFRPNYTPVTFGTVA
GRELGEFLTPIRKTCIHPWHQEQGALFEDVGNWKRPWYYPRGKEDLHAAVARECLAARNS
VGILDASTLGKIDVQGPDAVTLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRL
GEQHFLMSTTTGGAARVLDWMERWLQTEWPHLKVNLTSVTDHFATFAVVGPNARRVLQKV
CKDIDFSNEKFPFMSFREGSINSVFTRIMRISFSGELSYEVNVPANMGRAIWDAIIDAGK
EFDITPYGTETMHVLRAEKGYIIVGQDTDGSVTPYDLGMGGLVAKSKDFLGKRSLSRSDT
AGENRKQLVGLLSADKDFVLPEGSQIVAEPSSGPTATMIGHVTSSYFSPILRRSIAFALI
KGGLGKMGQEVSIPLANGRNIAAKISSLVFYDAEGVRQHVE
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaccacagactgggcagcggcggccgcattgaccgcggcgttcccctcact
ttcacattcaacggtaagcgttatgacggtttccagggcgatacgctcgcctcggcgctg
ctggcgaacggcgtgcatttcgttgcccgcagctggaaataccaccggccgcgcggcatc
gtcacggctggcgtggaagagccgaatgccttggtgcagctggaggcgggcgcttatacc
gtgccgaacgctcgcgccactgaaatcgagctttaccacggcttgagcgccaccagcgtc
aacgccagccctagcatcgagaatgaccgcatggcggtgaaccagctgtttgctcgtttc
atccctgccggcttctattacaagacgttcaaatggccgcgcagctggtggggcaagtac
gaagaagtgatacgcgaagcagccggcttcggcaaggcgccgaccgaactggatcccgac
cgctacgaaaagacctacgcccattgcgacgtgctgatcgccggtgccggtccggccggc
ctggcggccgcgtgggtggcggcgaattcaggggcgcgggtgatgttggtcgacgatcag
tcggaactcggcggcagcctgctatccggtccggccgtgatcgatggcttgccggcagcg
gcctgggtgagcaagatcagcgccgacttgcgggctctgcctgaagtcacgatcctgtcg
cgcagcaccgcattcggctaccaggatcataatctggtgactattacccagcgcctgagc
gaacatctgccgctggcgcaacggcgcggcaacaaggtacgcgaacgcctgtggaaagtg
cgcgccaaacatgtgatcctggccaccggcgcgcacgagcggcctatcgtgttcggcaat
aacgatttgcccggcatcatgctggcctcggcggtatcgacctatatccatcgttatggc
gtgctgcccggacgcaaagcggtggtcttcgccaacaacgacgatgcctaccagacagcg
cttgacttgaagagcaatggcgcggaagtgaccgtggtcgatccgcgcgcggctagcaac
agcagtttgccggctgccgccaaacggcaaggtgtccatatcatcaacgacgccgtggtg
gtcgcggccagcggcagccgccatgttaaggcggtggaagtagcgcaccacagggatggc
gtgccggggcagttcattacttcgcttgactgcgacttgctgggtgtgtccggtggctgg
aatccggtgatccacttgttcgcccaatctggcggcaaggcgcactggaacaatgacaaa
gcctgttttgtccccggctcggcaatgcagaaggaaaccagcgccggcgccgccaatggc
gacttcagtctgagcggcgccttgcgtgacggcgcgctggctgcgcagcaggccattgtt
tctgccggcttgaagccggtggagctgcctaactggaaagtagcggaattgtccgaagcc
cccatcatgccactgtggctggtaggcgagcgtaagcatgtcggtcgcggtcccaagcag
ttcgtcgattaccagaatgatgtctccgctgccgatatctacctggctgcgcgcgagggc
tatcactcggtagaacacgtcaagcgctacacagcgctgggcttcggtaccgaccagggc
aagctcggcaacatcaacggtatggcgatcttggccgaagtgctgggtaagagcatcccg
gaaaccggcaccactacctttcgcccgaattacacgccggtcacttttgggacagtggcc
gggcgcgagttgggcgagttcctgacaccgatccgcaagacctgtatccatccatggcat
caggagcagggcgcactgtttgaggacgtcggcaactggaaacggccatggtactacccg
cgcggcaaggaagacctgcatgcggcggtggcgcgcgaatgcctggcagcgcgcaacagc
gtaggcatccttgacgcatctaccttgggcaagatcgatgtgcaaggacccgacgccgtg
accttgttgaactggatgtacaccaatccctggaacaagctggaagtcggcaagtgtcgc
tatggcttgatgctggatgaaaacggcatggtgttcgacgacggcgtcacggtgcgcctg
ggtgaacagcatttcctgatgagcacgacgactggcggcgcggcgcgcgtgctggactgg
atggagcgctggctgcaaaccgaatggccgcacctgaaagtcaacctgacttcggtcacc
gaccatttcgcgacgttcgcagtggtggggccgaatgcccggcgcgtgctgcaaaaggtg
tgcaaggatatcgatttctccaacgagaaattccccttcatgtcgttccgcgagggcagc
atcaacagcgtattcacccgcatcatgcgcatcagcttctctggcgaactgtcgtatgag
gtgaacgtgccggccaatatggggcgggcgatctgggacgcgatcatcgatgccggcaag
gagttcgacatcacgccttatggcacagaaaccatgcatgtgctgcgggcggagaagggc
tacatcatcgtcggccaggataccgacggctcggtcacgccttacgaccttggcatgggc
ggcctggtcgccaagtccaaggattttctcggcaagcgttccttgtcgcgatccgatacg
gctggggaaaaccgcaagcagctggtgggcttgctcagcgccgataaagacttcgtactg
ccggaaggcagccagatcgtggccgagccgagcagcgggcctaccgcaacgatgatcggt
cacgtgacatcgagctatttcagtccgatcctgcggcgctcgattgcgttcgcgctgatc
aagggcggtctgggcaagatggggcaggaggtgagtattccgctggcaaacggacgcaat
atcgcagcaaaaatcagcagcctggtgttctacgatgcagaaggagtccgtcaacatgtt
gaatga
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