Collimonas arenae: LT85_1521
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Entry
LT85_1521 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1521
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT85_1521
Archaeal homologous recombinant proteins
LT85_1521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF349
Motif
Other DBs
NCBI-ProteinID:
AIY40679
UniProt:
A0A0A1FAH6
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All DBs
Position
1684795..1687332
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AA seq
845 aa
AA seq
DB search
MFGFLFKRADRAAPQPVVAPQAALRAEAKQVSDQARQQALQQAQALNDEAAAVAFIVQST
FADARLAAAQQVQSPAALEQVLQACRNTDRRVAKLMQARLDSVRQQQVIAGKAAACIAQA
QRLQQERQLMPNQVAELDRSWDGKDVPPEMQQQFVQLRAALADRLTSQASLQHNAIGLLG
SVRALHLQAKTAFDGEAENLSALDALEAQMAACVSHAEALTLPRHLATDFAQEAQALRKL
LVDLQQHQSALQARGALLANWEASTDALDPAALKGAWSGLPRLPAALLDDGLEQRYQALL
KQHTVVVVKQAKPQATATVAEPGDGAHIAEALDGLEKALEDGSLQLAVDFDKTLRAIDFK
QHKPSTAQLSRLTQARSELTRLQGWARWGGNVSREELIKAALELPAQALAPAELAKKIGS
LRARWKSLDVSSGSAPKNLWEGFDAACTAAYAPVAAHFQQQAEQRQANQVNARALIDEVL
QHAESALAADTASGVTPDWKLIAQFCQQKQQAWKALGAINRSEKKLLDSAFAAALQILLA
PLAEQQAIEVARREKLITEAAELPANQRDTADRVKELQARWQEQAKALPLPRQEEQELWL
RFRAACDAIFAQRKEAASSADAERRDNLRLREEQCAALEAALTQPEAGLAKILQQAQQDW
TRGGQVPRTAQAQIDARFQAAVMAAQAVLDQSRRQAALAQADALRAKLVLCQKAEASIVS
GEAGGLGAEDWQALPALAPAFEKALAARFARAVQNASGYAAALEAGRPLLAQELLRAEIL
AGGDSPAELSRERLQLQVEVLQASLKAGAAAKNVDQQLLHICGLSALMDDASLQRLLKLV
ALANS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatttctcttcaaacgcgcagaccgcgccgcaccccagcctgtagtcgctcct
caggccgctttgcgtgcggaagccaagcaggtttctgatcaggcgcggcagcaagcgctg
caacaggcgcaagccttgaacgatgaagccgcggcggttgcttttattgtgcaatcgacg
tttgccgacgcccgtctggcagcggcgcaacaggtgcagtcgccagcggctttggagcag
gttctgcaggcttgccgcaataccgaccggcgcgttgccaaattaatgcaggcgcggctg
gatagcgtacggcagcagcaagtcattgccggcaaggcggccgcctgtattgcgcaggcg
cagcgtttgcagcaagagcggcagctgatgccgaaccaggttgcagaactggatcgtagc
tgggatggcaaagacgtgccgccggagatgcagcagcaattcgtgcaattgcgggccgcg
ctggcggatcgcctgacttcgcaggcaagcttgcagcacaatgccatcggcttgctgggc
agtgtccgggctctgcatctgcaagctaaaacagcattcgacggcgaggcggaaaatctg
tcggctttggatgcgctggaagcgcagatggcggcgtgcgtcagccatgccgaagccttg
accttgccacgtcatctggcgaccgattttgcgcaggaagcgcaagctctgcgcaaactg
cttgtcgatttgcagcaacatcaatccgcgttgcaggcacgcggtgcattgctggcgaac
tgggaagcgtcgaccgatgcgctggatccggcagctttgaaaggagcatggtcagggttg
ccaagattaccggcagccttgctggatgacggcttggaacaacgttatcaggcgcttctg
aaacaacataccgtggtggtggtcaagcaagcaaagccacaagctacggcaaccgtagcg
gagccgggcgacggtgcgcacatcgccgaagccctggatggtctcgaaaaagcgctggaa
gacggttcgttgcaactggcggtggatttcgataaaaccctgcgcgcgattgatttcaaa
caacacaaaccgagcacggcccaactcagccgcctgacccaggcgcgtagcgaattgacc
cgcctgcaaggctgggcgcgctggggtggcaatgtatcccgtgaagaattgatcaaggct
gcgctggaactgccggcgcaagcattggcgccggctgagctggcaaagaaaatcggcagt
ttgcgtgcgcgctggaaatccctggatgtgagttccggatccgcgccaaagaacttatgg
gaagggtttgatgctgcttgcaccgctgcctatgcgccggtagccgcgcatttccagcag
caagccgaacagcgtcaggcgaatcaagttaatgcgcgagcattgattgatgaggtgttg
cagcatgcggaaagcgcgttggccgcagataccgccagcggcgtaacgccagactggaaa
ttgattgcgcagttttgccagcaaaagcagcaggcgtggaaagcactgggagcgatcaac
cgcagcgagaaaaaattgctcgacagcgcctttgccgccgcactgcaaatcttgctggca
ccactggcagaacaacaagcgattgaagtcgcccgccgcgaaaagctgatcaccgaagcc
gcggaattgccggccaaccagcgcgataccgctgatcgcgtcaaagaattgcaggcgcgc
tggcaagaacaagccaaagccctgcctttgccgcgccaggaagagcaggagttatggctg
cgtttccgcgccgcatgtgacgccatctttgcccagcgcaaggaagccgcctccagcgcc
gatgccgaacgtcgcgacaatctgcgtttgcgcgaagaacaatgcgccgccctggaagct
gcactgacacagcccgaggcgggcctagcgaaaatcttgcagcaagcgcaacaggattgg
acgcgtggcggccaagtgccgcgtactgcccaggcgcaaatcgatgcgcgtttccaggct
gcggtaatggcggcgcaggcagtactcgatcaaagccgccgtcaggccgcgctggcgcaa
gccgatgcactgcgcgccaagctggtcctgtgccagaaagctgaagctagcattgtcagc
ggcgaagctggcgggttgggcgccgaagactggcaagcactgccggcgctggcgccggcg
tttgagaaagcccttgctgcgcgttttgcgcgcgctgtccaaaatgctagtggctacgct
gcagcacttgaagcaggccgtccgctgttggcgcaagagttattgcgtgctgaaatcctg
gctggcggcgacagtccggccgaattgtcgcgtgaacgcctgcagttacaggtagaagta
ttgcaagcctcgctcaaggccggcgcggcggcgaaaaatgtcgatcagcagttgttgcat
atctgcggcttgtcggcactgatggatgacgcgtcgctgcaacgcttgctgaaactggtt
gctctggccaattcgtaa
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