Collimonas arenae: LT85_1628
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Entry
LT85_1628 CDS
T03512
Symbol
xylF
Name
(GenBank) Xylose ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
care
Collimonas arenae
Pathway
care02010
ABC transporters
care02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT85_1628 (xylF)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LT85_1628 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_1628 (xylF)
Transporters [BR:
care02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
LT85_1628 (xylF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
ThiF
RC-P840_PscD
Motif
Other DBs
NCBI-ProteinID:
AIY40786
UniProt:
A0A0A1F8H7
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All DBs
Position
1794630..1795568
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AA seq
312 aa
AA seq
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MKKLALAAILPFTLALAFSASAQARELKSVGITVGSLGNPYFVTLANGAKAKALQINPNV
KVTAVSADYDLSKQFTQIDNFISAGVDLILLNATDPVAIEPAIKKAQKAGIVVVAVDVGA
KGVDATVQTDNEMAGKLACKYLVEKLGGKGNVIIQNGPQVTSVIDRVKGCKTVLTAAPGI
KVLSDDQDGKGSREGGLNAMQGYLTRFPKIDGLFAINDPQAIGSDLAAKQLKRSGIIITS
VDGAPDIEAVLKTDSAIKASASQDPWAQAQDAVAVGYDILNGKRPAQPTLLLAPVLITKD
NIASYKGWSSKR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcgctctcgcagcaattcttccgtttacgctagcactggcattttcggca
tcggcacaggcgcgtgaactgaaatcggtcggcattacggtcggctcgctcggcaatcct
tatttcgtgacgctggctaacggcgccaaggccaaggcgctgcagatcaatcccaacgtc
aaggtcactgcggtatccgcagattatgacttgagcaaacaattcacccagatcgataat
tttatttcggccggagtcgatctgatcctgttgaacgccaccgatcccgtggcaattgag
ccggccatcaagaaagcgcaaaaggcgggcatcgtggtggtggcggtggacgtcggcgcc
aaaggcgtcgatgcgacggtgcagaccgataacgaaatggctggcaagctggcttgcaaa
tatctggtcgagaaactgggcggcaagggtaatgtgatcatccagaacgggccgcaggtg
acttcggtgatcgatcgtgtcaaaggctgcaagactgtgctgactgccgcgccgggtatc
aaggtgctgtcggatgaccaggatggcaagggatcccgcgaaggcggcctcaatgcgatg
caaggctacctgacgcgcttccctaaaatcgatggtctgttcgccatcaacgatccgcaa
gcgatcggcagcgatctggctgccaagcagttgaaacgcagcggcatcatcatcacttcg
gtggacggtgcaccggatatcgaagcggtgctgaagacagatagtgcgatcaaagcgtct
gccagccaggatccttgggcccaggcgcaggacgcggtggcggtcggctatgacatcctc
aacggcaagcgtccggctcagccaaccctattgctggcgccggtgctgattactaaggat
aatatcgccagttacaaaggctggtccagcaagcgataa
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