Collimonas arenae: LT85_1708
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Entry
LT85_1708 CDS
T03512
Symbol
recO
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
care
Collimonas arenae
Pathway
care03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LT85_1708 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1708 (recO)
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LT85_1708 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LT85_1708 (recO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AIY40866
UniProt:
A0A0A1F8P0
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Position
1876085..1876924
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AA seq
279 aa
AA seq
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MNAIIADAEQALPEDAAVLISVAPGPAATAAVVPKRRARIPEKDTRVTAQPGFVLHSYPH
RETSLIIDVFTRDYGRIALVAKGAKRPMSKLRGVLQTFQPLSLSWSGKSEIRTLIAAEWV
GGLLPLEKSALLCGFYLNELLVKLVARDDPHVALFNHYVTTLNQLAHLEPAPIVLRQFER
ALLKQTGVAGDFTRCTSSRQPVDPAESYVVDPERGPRVARAADSWPRVSGKTLLDMEQED
YSDVATQAQSKVLMRFLLAHHLGGAPLNTRQILIDLMQL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgatcatcgctgatgcagagcaagcgctgccggaagatgccgctgtcctgatc
agcgttgctcccggccctgctgctactgctgccgtcgttcccaagcgacgggcgcggata
ccggaaaaagatacgcgtgtcactgcacagcccgggttcgtactgcacagctatccgcac
cgcgaaaccagcctcatcatcgatgttttcacccgcgattacggccgcatcgcgctggtc
gccaaaggcgccaagcgtccgatgtcaaagttgcgcggcgttctgcaaaccttccagccg
ttgtcgctgagttggagcggcaaatcagaaatccgtaccttgatcgcggccgaatgggtt
ggcggtctgctgccgctggaaaaatcggcgctgctgtgtggtttctacctgaatgaactg
ctggtgaaactggtcgcgcgtgatgatccgcatgttgccttgttcaatcattacgtcaca
acccttaatcagctggcccatctggagccggcgcctattgtgctgcgccagttcgaaaga
gcgctgctcaagcagaccggagttgccggcgatttcacgcgttgtaccagtagccgccag
cctgtcgatccagccgaaagctacgtggtcgatcctgagcgcgggccacgcgttgcacga
gcagccgattcctggccccgggtttccggcaagactctgctggacatggagcaggaagat
tacagcgatgtcgctacgcaggcgcaaagcaaggtgctgatgcgcttcttgctggcccat
catctgggtggcgcgccattgaacacacgccagatcctgattgacctgatgcagttgtaa
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