Collimonas arenae: LT85_1820
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Entry
LT85_1820 CDS
T03512
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
care
Collimonas arenae
Pathway
care03030
DNA replication
care03430
Mismatch repair
care03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LT85_1820
03430 Mismatch repair
LT85_1820
03440 Homologous recombination
LT85_1820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
care03032
]
LT85_1820
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1820
Enzymes [BR:
care01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LT85_1820
DNA replication proteins [BR:
care03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LT85_1820
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LT85_1820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_18
AAA_28
AAA_30
AAA_2
AAA_assoc_2
nSTAND3
Glyco_tranf_2_5
TsaE
Herpes_Helicase
DUF3646
AAA_19
AAA_24
Rad17
SKI
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AIY40978
UniProt:
A0A0A1F8B9
LinkDB
All DBs
Position
1992143..1994311
Genome browser
AA seq
722 aa
AA seq
DB search
MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGVDGKGGITAEPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLDNILGQEKIEFETPALRLLAQGAQGSMRDALSLTDQAIAYAAGKVTLE
AVQGMLGALDQSYLIRVLDALAQKDGPGLLAVADDMASRSLSYSAALQDLGTLLHRIALA
QSVPAALAEDLPEREEVIRLASLFDAEEVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPQADGSIVTPPSASRSRVSATPAAQVAASRPTAMAQATAPAAAPVAAPAATAARLS
SAPQTISTSAPAVRPDTSAMSPARAALEAARAAASSRKGGTARPAPAQPAVAPAPAASAP
VATASPPAAVAPRPVAPAYEPQNSSVPPWEEEIPLPMDLPDTEFSSSAAEKKTESYSQSM
QATSSRAAAGNNGNGAGNSRQTPRPEPVVQQVETPPAEPLPPLVLQPDANLNWDGDWPLL
ASSLSVRGVAHQLAQQSELIKCDSSGVAALIYLRIPFDTLRSAGSIDKLATALTEHFGRP
VKVETELGTVRHTANAQAMAAQAERQRLAEQTAKNDPFIQSMMREFGASIVPGSIKPLGE
AK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccaagttctcgcccgtaaatatcgccccagaagtttcgatacgctggtcggc
caggaacacgtcgtaagggccttgacgcacgccttggaacaacagcgtctgcaccacgcc
tatctgtttaccggcacgcgcggcgtaggtaagacgaccttgtcgcggatcctggcgaaa
tcgctgaattgcatcggcgtcgacggcaagggcggcattactgcggaaccgtgcggcgta
tgcgacgcctgcgtggcgatcgatgccggccgcttcgttgattatatcgagatggatgcc
gcttcgaatcgcggcgtcgatgaaatggcgcagttgctggaacaggctgtgtacgcgccg
tccaacgcccgtttcaaggtctacatgatcgacgaagtccacatgctgaccaaccacgcc
ttcaattcgatgctgaagacgctggaagaaccgcctgaacatgtcaagttcatcctggcc
actaccgacccgcaaaagattccggtgacggtgttgtcgcgctgcctgcagttcaacctg
aagcagatgccgccaggccacatcatcagtcatctggataatatcctcggccaggaaaaa
atcgaatttgaaacgcccgctttgcgcttgctggcgcagggtgcccagggctcgatgcgc
gatgcgctgtcgctgaccgaccaggcgattgcctatgctgccggcaaggtgacgctggaa
gcggtgcagggcatgcttggtgcgctggaccagtcttatctgatccgcgtgctagatgcg
ctggcgcaaaaagacggccccggcttgctggcggttgccgacgatatggccagccgcagc
ctgtcatatagcgccgcgctgcaggatctcggtaccttgctgcacaggattgcgctggcg
caaagcgtgccggcggcccttgcggaagatttgcctgaacgcgaagaagtgattcgcctg
gcatcgttgttcgatgccgaagaagtgcagctgttttaccagatcgctgtccacggccgc
aatgaactgggcttggcgccggacgaatacgccggtttctcgatgaccttgctgcgcatg
ctggccttccggccgcaagccgacggcagcatcgtgacgccgccatcggccagccggtcg
cgggttagcgcaacgcctgcggcccaggtggcggcatccaggccgactgcgatggcgcaa
gccacggcgccggcggctgcgcctgtagccgcacctgccgctaccgccgcccgtttgagt
agtgcgccgcagaccatcagcaccagcgcaccggcagtgcgtcccgacaccagcgccatg
agtccggccagggcggcgcttgaagcggcgcgtgcggccgcttcgtcgcgcaagggcgga
acagctcgtcctgctccagcgcagcctgcggttgccccggcacctgcagcatctgcgcct
gtggcgacggcaagtccaccggcagcagttgcgccgcggcctgtagcgcccgcctatgaa
ccgcaaaattcgtcggtgccgccatgggaggaagagatcccgttgcctatggatttgcct
gataccgaattttccagttcggcggctgaaaaaaaaactgaatcgtattcgcaatcgatg
caagcgacgtcatcgcgcgccgcagcgggtaataatggtaatggcgccggtaactcgcgc
cagacgccgcgtccggaacctgtggtgcagcaagtggaaacgccgccagcagaaccttta
ccgccgctggtgctgcagcccgacgccaatctgaattgggatggcgactggccgttgctg
gcatcaagtttgtcggtgcgcggcgtggcgcatcaactggcgcagcagagcgaactgatc
aagtgcgacagcagcggcgtcgccgcgctgatttatttgcgtattcctttcgataccttg
cgttcggctggcagtattgataaattggcgaccgcgctgaccgaacatttcggtcgtccg
gtcaaagtggaaaccgagctaggcacggtgcgtcacactgccaacgcgcaagcaatggca
gcgcaggcagagcgtcagcgcctggcggagcagaccgcgaaaaacgatcccttcattcaa
agcatgatgcgtgaattcggggcgtcgattgtgccgggatcaatcaaaccattgggtgaa
gcgaagtag
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