Collimonas arenae: LT85_2105
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Entry
LT85_2105 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K22486
transcriptional regulator HilA, main transcriptional regulator of SPI1
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_2105
Transcription factors [BR:
care03000
]
Prokaryotic type
Other transcription factors
Others
LT85_2105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_16
TPR_2
TPR_19
Trans_reg_C
TPR_CcmH_CycH
TPR_1
TPR-S
TPR_21
TPR_9
Motif
Other DBs
NCBI-ProteinID:
AIY41263
UniProt:
A0A0A1F975
LinkDB
All DBs
Position
complement(2324796..2326160)
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AA seq
454 aa
AA seq
DB search
MLNSSSALANIDPLSAGFDVDQDGFIFYKNSLLFLPPKERGTFRLLLGAWPKVVEKKDFS
KNVWAGRMSDDGLARCITRLRRALSYTGVVQIDSFYGQGYRLAILSDKVRRLSLVPATVH
APEKPDVVKPHAALVEACIHARQLLENRSQDAFSQAESILKNVISKAPDYMLAKLLLAQY
VAERAFFDGNIQRSQIDDALSQLKLVQDAEPYLQGLQSQRGYLLDCKWHFDEARGAHEQA
LQMFPDDDAAFYRYGFHLLNRNAPSEAISAFRTAVQLNPFSPNMAGALVRAYACANIDPA
EVLAQARSAYSSHPDSPYVYLQLLYILAMVDPQPELAHAARHFVQKNRYAHAQSSRAVAY
ILARCGNHAGALEVIEKHGSIHGIHLAALVAMGMIDEAMIKVKAAAETGFGVLPFSLSIP
ECAELKQHPDYPEVYAKVFSRMPPEISNSSAEED
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattcatcaagcgcacttgccaatatagatcctttatcagccgggttcgatgta
gaccaggatggctttattttttacaaaaactcacttctctttttgcctcccaaggaacgc
ggaaccttccgcctgctgttgggcgcatggccaaaagtggttgaaaaaaaagatttttca
aaaaatgtttgggccgggcgcatgtcagatgatggtttggcgcgatgtattacgcggctg
cgccgagccctctcctataccggtgtagtacagatcgactccttctatggtcaaggttat
cgcttggcgattttgtcggataaggtgcggcgattatcccttgtaccggcgacggttcat
gcccccgaaaaacctgatgtagtaaagcctcacgccgcattagtcgaggcttgcatccac
gcccggcaactactggaaaatcgttcgcaggatgcattttcccaagcggagtcaatactc
aaaaatgtcatttccaaagctcccgactatatgctcgccaaactgttacttgcacaatac
gtcgccgagagagcattttttgatggcaatattcagcgctcacaaattgacgatgccctt
agtcaattaaagttagttcaagatgccgaaccctatttgcaaggcctgcaatcgcagaga
ggttacctcttggattgtaaatggcatttcgatgaagccaggggtgcacatgaacaagca
ttacaaatgtttccagacgacgacgccgccttttaccgttatgggtttcatctattaaac
aggaatgctccatctgaggccattagcgcttttcgtaccgctgttcaactcaatccattc
tcgccgaatatggccggcgcgctggtacgtgcctacgcttgcgcaaatattgatccagcc
gaagtactggctcaagcgcgaagcgcatattcatctcatccggatagtccctatgtttat
ctgcaactactctacatactagccatggttgatccgcaaccggaactcgcccatgctgca
cgtcatttcgtacaaaaaaaccgctacgcacacgcccaatcgtcgagggccgtggcatac
atacttgcgcgttgcggtaatcatgctggggcgctggaagtcattgaaaagcatggcagt
atccatggaatacatctggcagctttagttgcaatggggatgattgacgaagcgatgata
aaagtgaaggcggcagctgaaaccggatttggcgtcttgcctttttcactcagcattccg
gaatgtgcagagttgaaacaacatccagactatcctgaggtgtacgccaaagtgttttcc
cgcatgcctcctgaaataagtaacagctcagcggaagaagattga
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