Collimonas arenae: LT85_2107
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Entry
LT85_2107 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K22486
transcriptional regulator HilA, main transcriptional regulator of SPI1
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_2107
Transcription factors [BR:
care03000
]
Prokaryotic type
Other transcription factors
Others
LT85_2107
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
Trans_reg_C
TPR_CcmH_CycH
ANAPC3
TPR_16
TPR_11
TPR-S
Suf
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
AIY41265
UniProt:
A0A0A1FBZ8
LinkDB
All DBs
Position
complement(2327786..2329141)
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AA seq
451 aa
AA seq
DB search
MLWVTKMINSSSALANIDPSSAGFDVDLDGFIFYKNSLLFLPPKERGAFRLLLSAWPKVV
SKEDFSKNVWAGRMSDDSLARCITRLRRALSYTGVVQIDSFYGQGYRLAILSDKVRRLTG
VPATVHVPEKSDVVKPHAALVEACIHARQLLENRSLDSLSQAESILKNVISKAPGYMLAK
LLLAQYVADRAFYDGNIQRSQIDDALNQLRTVEVAEPYLQGLQSQKGYLLDAKWHFDEAR
VTHRQALQMFPDDDAAYYRYGTHLIDTNASSEAIRVLRSAVQLNPHSPKIAVALARAYAC
ENLDQAEVLAQARSAYSSHPDSPAAYLYLLYILAWIDPQPEIAHAVRHFVQKDRHAHAFA
SRAVAYVLARCGDHAGALEIIEKHSSIHGIHLAALIAMGMIDEAMIKVKAAAETGFGVLP
FSLIVPECAELKQHPDYPEVYAKVFSRMPSE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtgacaaaaatgattaattcatcaagcgcacttgccaatatagatccatca
tctgccgggttcgatgtagacctggatggctttattttttacaaaaattcacttctcttt
ttgcctcccaaggaacgcggggccttccgtctgttgttgagtgcctggccgaaagtagtt
tcaaaagaagatttttcaaaaaatgtttgggccggacgtatgtcagatgatagtttggcg
cgatgtattacacggctgcgccgagccctctcctataccggtgtagtacagattgactcc
ttctatggtcaaggttatcgcctggcgattttgtcggataaggtacggcgattaacaggt
gtgccggcaacggtacatgtccctgaaaaatctgatgtggtaaagcctcacgccgcatta
gtcgaggcttgcatccacgcccggcaattactggaaaatcgctcattggattccctgtcc
caagcggaatcaatactcaaaaatgtcatctctaaagctcctggttatatgctcgccaaa
ctgttgcttgcacaatatgtagccgacagggcattttatgacgggaatatacagcgctca
caaattgacgacgctcttaaccaattaaggacagttgaagtcgccgagccctatttgcaa
ggcctgcaatcacagaaaggctatctccttgatgccaaatggcatttcgatgaagccagg
gtcacgcacagacaagcattgcaaatgttccccgacgatgacgccgcctattatcgttat
ggcactcatctgattgacaccaatgcgtcatccgaggccatccgcgttttacgttctgcc
gttcaactcaatccacactcgccgaagatagctgtggcgttggcgcgcgcctacgcttgc
gaaaatctggatcaagctgaagtgcttgctcaagcacggagcgcatattcatctcatccg
gatagtcccgcagcttatctgtatttactctatatactggcctggatagatccgcagccg
gagatagctcatgccgttcgtcattttgtacaaaaagaccgtcatgcacatgccttcgcc
tccagggccgtagcgtatgtgcttgcacgttgcggtgatcatgcaggagcgctggaaatc
atcgagaaacatagcagtattcatggaatacatctggcggctttaattgccatgggaatg
attgacgaagcgatgataaaagtgaaggctgcagctgaaaccggatttggcgttttgcct
ttttcactcatcgttccggaatgtgcagagttgaaacagcatccagactatcccgaggtg
tacgccaaagtattttcccgaatgccttctgaataa
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