Collimonas arenae: LT85_2197
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Entry
LT85_2197 CDS
T03512
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_2197 (radA)
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LT85_2197 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_22
GvpD_P-loop
AAA_24
Lon_C
SLFN-g3_helicase
AAA_16
ChlI
RecA
DUF7125
AAA_14
Rad51
nSTAND3
NTPase_1
AAA
AAA_5
ATPase_2
CobU
DUF7129
MCM
ABC_tran
NB-ARC
AAA_29
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AIY41355
UniProt:
A0A0A1FC65
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All DBs
Position
2429813..2431183
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AA seq
456 aa
AA seq
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MAKAKTNYTCTECGGVANKWTGQCPSCGQWNTLVETIVEAVGNRFSNQHQGLAQAAPVMT
LADIDAIDVPRFGTGIEEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANLSKIKKV
LYVSGEESGAQIALRAKRLVVDARDLKFQAEIQLEKIINTLVDHKPDVAVIDSIQTVYSD
ALSSAPGSVAQVRECAAQLTRIAKQSGITIIMVGHVTKEGALAGPRVLEHIVDTVLYFEG
DTHSSFRLVRAIKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDNQVPGSCVMVTQE
GTRPLLVEIQALVDASHVPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAVGG
VKITEPAADLAVLLAINSSMRNRPLPRGLVVFGEVGLAGEIRPAPRGQERLREAAKLGFS
IAMIPKSNAPKQDIEGLKVISVERIDDALSKIRDAE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctaaaaccaattacacctgtaccgaatgtggcggcgtcgccaataaatgg
accggccagtgcccgtcgtgcgggcaatggaacaccttggtggaaaccattgtagaggct
gttggcaaccgtttttcaaatcagcatcagggcctggcgcaagccgcgccggtaatgacg
ttggccgatattgacgccattgacgtgccgcgtttcggcaccggcatcgaggagttcgac
cgggtgctgggtggcggtttggttgctggcggcgtggtgttgatcggcggcgatccgggg
atcggtaagtcgaccttgctattgcaggcgctggcgaatctgtcgaagatcaaaaaagtc
ctgtatgtcagcggtgaagagtcgggtgcgcaaatcgcattgcgcgccaagcgactggtg
gtggatgccagggatctcaagttccaggctgaaatccagcttgaaaaaatcatcaacacg
ctggtggatcacaagccggacgtggcggtcatcgattcaatccagacggtctattccgat
gcgctcagttcggcccctggatcggtagcgcaggtgcgtgaatgtgcggcgcagctgacg
cgtatcgcgaagcaatccggcattactatcatcatggtcggccacgtcaccaaagagggc
gcgctggccggtccgcgcgtgctggaacatatcgtcgataccgtgttgtacttcgaaggc
gatacccactccagtttccgccttgtacgagcgatcaagaaccgttttggcgcagtcaat
gaactcggcgttttcgcgatgactgaaaaaggcttgaaaggcgtatccaatccttccgct
ttgtttctgtcgcagcacgataaccaggtgccgggttcttgcgtgatggtgacgcaagag
ggaacacgtcctttgctggttgagattcaagccttggtcgacgcctcgcacgtgccgaac
gcgcgccgcttgtcagtcggtttggagcagaaccgtttggcgatgttgctggcggtgctg
catcgccatgcaggcatcgcagcgtttgatcaagacgtattcataaacgcggtggggggc
gtcaagatcaccgaaccggccgccgatctggcagtgttgctggcgattaattcgtcgatg
cgcaaccggccgttgccgcgtggactggtggtgtttggcgaagtcggcctggccggagaa
atccgccctgcgccgcgcggccaggagcgcttgcgggaagcggccaagctgggattttcg
atcgccatgatcccgaaatcgaatgccccgaaacaagatattgaaggtttgaaagtgatc
tcggtggaacgcatcgatgacgctttgagcaaaatacgcgacgctgaataa
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