Collimonas arenae: LT85_2203
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Entry
LT85_2203 CDS
T03512
Name
(GenBank) Sigma-fimbriae tip adhesin
KO
K27078
spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
Organism
care
Collimonas arenae
Pathway
care02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT85_2203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
care02044
]
LT85_2203
02035 Bacterial motility proteins [BR:
care02035
]
LT85_2203
Secretion system [BR:
care02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LT85_2203
Bacterial motility proteins [BR:
care02035
]
Pilus system
Fimbrial proteins
LT85_2203
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Gene cluster
GFIT
Motif
Pfam:
SCPU
Motif
Other DBs
NCBI-ProteinID:
AIY41361
UniProt:
A0A0A1FA23
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Position
complement(2437388..2438422)
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AA seq
344 aa
AA seq
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MSNHFKRMMLFVLLLLGSVSLPSSALAQSVNCPNPTIANVQFGTIDFATGTVNVSGSVAW
SCTSTGILGLILSPQANIAMCLNLNTGTGGAQANPRLLSSGSNTLNYQIYTNAGDSQIWG
STATPTTPTPLLIPVSIPAGLLFSTTVNGNTPFYAQLPGTQTSAPASTYNSTLGVAVSGS
YTLNANTPLSSCSSGTTVLNTGSATFVTSATVQKFCLVTTNNVNFGAIPSTAVNTTASSS
INVTCTNGTPYFVGLSPSNANTAGAGVMSGSIGGNTDKVPYQLSSTPGPSGTVWGNTATS
TTVGNGKAGTGTGLAQPLNVYATVPGANYRPDSYSDTVTVNVNY
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcactttaaacgcatgatgctgttcgttctgctgctactcggcagcgtcagc
ctgccaagctcggccctggcccagtcagtcaattgccccaaccccaccatcgctaacgtt
cagttcggcaccatcgatttcgcaaccggaaccgtcaatgtcagcggctcggtcgcttgg
tcctgtactagcacgggaatcttgggacttattttgtctccccaggctaacatcgcgatg
tgcctcaatcttaataccggcaccggtggcgcgcaggccaatccacgtttgctaagtagt
ggcagcaatacgctgaactaccagatatacaccaatgctggagatagccaaatatggggt
tccaccgcaacgccgacaacgccgacaccgctgcttattccagtgagcattccggccggc
ctgctcttctcaaccactgtcaatggcaatacgccgttctacgcacaactacctggcaca
cagacgagcgcgccggcgagtacttataacagcacgctgggcgtcgcggtcagtggctct
tacactctcaacgccaacacgccactgagctcttgctcgagcggcacaaccgtactcaat
actggcagcgccacgtttgtcacgtccgcgacagtccaaaaattctgtcttgtcaccacc
aataacgtcaatttcggtgcaattccgtcgactgcggtcaacaccactgccagcagcagc
atcaacgtgacgtgcaccaatggcacgccttatttcgtaggcctttcaccctcaaacgcc
aacaccgctggagctggcgtcatgtcgggttccatcggcggcaacaccgacaaggtgcct
taccagctcagttccacgccaggccccagcggaacggtatggggcaacacagcgacttcg
acgacggtgggtaatggcaaggcggggacgggaacaggtctggcccagccactgaatgtc
tacgcgaccgtaccgggcgccaattacaggcccgacagctactccgataccgttaccgtc
aatgtgaattattag
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