Collimonas arenae: LT85_2204
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Entry
LT85_2204 CDS
T03512
Name
(GenBank) Sigma-fimbriae usher protein
KO
K07347
outer membrane usher protein
Organism
care
Collimonas arenae
Pathway
care02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT85_2204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_2204
02044 Secretion system [BR:
care02044
]
LT85_2204
02035 Bacterial motility proteins [BR:
care02035
]
LT85_2204
Transporters [BR:
care02000
]
Other transporters
Pores ion channels [TC:
1
]
LT85_2204
Secretion system [BR:
care02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LT85_2204
Bacterial motility proteins [BR:
care02035
]
Pilus system
Fimbrial proteins
LT85_2204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AIY41362
UniProt:
A0A0A1FEV1
LinkDB
All DBs
Position
complement(2438419..2440824)
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AA seq
801 aa
AA seq
DB search
MVRRARNIFRWPTALAELILLQSLLVSGSYAADTATADQVAHTKLISVNSDSVVRLGGTD
LYLEVTLNGADGGLVHFGYLNGELWASTETLRQIGFVLPANTPDPVRLGGMQGVEVNYEA
SRQAVTINAPLQILKLDTTVLNAPENNRPRATASPGVLLNYNIYGTGGQNGSSSVSAFTE
IRAFNDSGVLSSTALSQATRSAGDHWQNRSVRLDTSWSTSFPDSRLTLRIGDTLTDALSW
SRATRIAGVQLGTNFALQPYLITAPLPSFIGSATLPSNVQLYVNGIQQYNGKVPAGPFQL
STIPNISGAGNAQVVLTDTLGRSTTLNFSLYDEHRLLQKGLSDWSAEFGVVRENYGLESF
GYSHDPTGSGTWRYGVSNNMTMEAHAEATRGLINAGGGGALLLGSAGGVVSGSLARSDHA
GQSGTLYSLGYSWRNDRFNFSGSGIRTTGDYSDVATLYGPPPPSVSAQMAAGYSTKHLGN
FSLSYIHLRYPLQDATRYVNANWSKSMGQSASLSLNLNQNLDKAAERSVFLVATFSMERN
VTVSSSLQHDSTGTGLVLNASQSPPSEGGLSWRAALRQGDKQNGGQGELDYLGRYGQVQA
GVNAVGNTRYGYAGADGALVLMGSDVFAARHINDGFAVISTDGVAKVPVKLENNLIGTTD
SRGMLLVSPLNAYQNNQISIDPMDLPADVRIDRVKALATPTDRAGTLVHFGITPIRAASV
ILHGAEGEPLPLGSQVTINGQSSNGAIIGFDGTVYLDTLDEHNTLIVHMPAGDCRASFDY
HNESKTIPAIGPLLCHKDALP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagagcgcgcaacatctttcgctggccgaccgctctcgctgagctcattctg
ctgcaaagcttgcttgtttccggcagctatgccgccgatacggccacagcagaccaggta
gcacataccaagcttatctccgtcaatagcgatagcgtagttcgtctcggcggcaccgat
ctgtaccttgaagtcactctcaatggcgccgacggtggcctcgtacatttcggctacctt
aacggtgaactatgggccagtaccgagactctgcgccagattggtttcgtcctgccggcc
aatacaccggatccggtacgcctgggcggcatgcaaggggtggaagtcaactatgaagcc
agtcgccaggccgtgacgatcaatgcgcccttgcaaatactcaagctggacacgacagtg
ctcaatgcgcctgagaacaaccgcccacgcgccacagcctcgcccggcgtcctgttgaac
tacaacatctacggcaccggtggccagaacggtagcagcagcgtgagcgcgttcaccgaa
atacgcgcatttaacgacagtggcgtactgagttccactgccctctcacaggctacccgc
agcgctggcgatcactggcaaaaccgttccgtgcgcctcgataccagctggagcacttcg
tttccggacagccggttgaccctgcggatcggcgacacattgaccgacgcattgtcttgg
tcgcgcgccacccgcatcgcaggtgtacaactgggtaccaatttcgccttgcagccctat
ctgattacggcgccgctgccgtcattcatcggttccgccactttgccgtccaatgtgcag
ttgtatgtcaacggcatccagcaatataacggcaaggtaccggccggaccgttccagctc
agcacgattcccaacatcagtggcgcaggcaacgcgcaggtggtactgaccgatacactg
ggccgcagcaccacactcaatttctcgttgtacgacgaacaccggctgctgcagaaaggg
ttgtccgactggtcggcggaattcggcgtagtgcgcgaaaactacgggctggaatcgttc
ggctatagccatgaccccaccggcagcggcacctggcgctacggcgtcagtaacaacatg
acgatggaagcgcatgctgaagccacccgcggcctgatcaacgcgggcggcggcggtgcc
ttgttgctgggcagcgccggcggcgtggtttccggatcgctggcccgcagcgaccatgca
ggccaaagcggtacgttgtactcgctgggctacagctggcgcaacgaccgcttcaatttc
agcggtagcggaattcgtaccacaggcgactacagcgacgtggccacactctacggcccg
ccgccgcccagcgtcagcgcgcagatggcagccggttacagcaccaaacacctaggcaac
ttcagccttagctacatacacctgcgctacccgttgcaggacgccacccgctatgtcaac
gcaaattggtccaaatccatgggacagtcagcgtcgctgagcctgaacctcaatcagaat
ctggataaggcggcggaacgaagcgtcttcctggtcgctaccttctcgatggagcgcaat
gtgacggtaagcagcagtctgcagcacgatagtactggcactggcctggtcctcaatgcg
agccagtcgccgccgagtgagggcggcctcagctggcgcgcagcattgcgccagggtgat
aagcagaacggcggccagggcgagctggactacctgggccgctatggccaggtgcaagcc
ggcgtcaacgccgttggcaacacgcgctacggatatgcaggcgccgacggcgcgctggtg
ttgatgggtagcgatgtctttgcggcgcggcatatcaatgatggtttcgccgtgatatcc
accgatggcgtcgccaaggtgccggtgaaacttgagaacaacctgatcggcacaaccgac
agccgcggcatgctgctggtctcgccgctgaatgcctatcagaacaaccagatcagcatc
gatcccatggatcttcctgcggatgtacggatcgatcgcgtcaaggcgcttgccacgccg
accgaccgcgccgggactctggtgcactttggcatcacgccgatacgcgccgcctcggtg
attctgcatggcgccgaaggcgagccgttgccgctcggcagccaggtgaccatcaacggc
cagagcagtaacggcgcgataatcgggttcgatggtacggtctatctggatacgttggat
gaacacaacacgctcatcgtgcatatgcccgccggggattgccgggcaagcttcgattat
cacaacgagagcaagaccattcctgcgatcggtcctctgctttgtcacaaggacgcattg
ccatga
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