Collimonas arenae: LT85_2305
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Entry
LT85_2305 CDS
T03512
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
care
Collimonas arenae
Pathway
care03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LT85_2305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_2305
Enzymes [BR:
care01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LT85_2305
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LT85_2305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AIY41463
UniProt:
A0A0A1F9P3
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All DBs
Position
2568150..2568815
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AA seq
221 aa
AA seq
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MQKTIAADSSFFVPSYWEDAKAELMKRDRIMRKLIPQFGDLHLVGRGEAFTTLARSVVGQ
QITVKAAESVWQKLLLVCPKTTPAQVLKAGPEQLAACGLSKRKADYILDLADHFKAKRVD
AEQWQEMEDEDVIADLTQIRGIGRWTAEMFLIFNLLRPNILPLDDPGLLKGISVNYFSGE
PVSRSDAREVSANWEPWRTVATWYLWRSLDPVSTEYQGITE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacgatagctgccgactccagcttttttgtgccttcgtattgggaagacgcc
aaggccgagttgatgaagcgtgaccgcatcatgcgtaaattgattccgcagtttggcgat
ctgcatctggttggccgcggcgaggcgtttaccacgctggcgcgttctgtggtggggcag
cagattacggtcaaggcggcagaatcggtatggcagaaactcttgctggtttgtcccaag
accacgccggcgcaggtattgaaagcaggccctgaacagttggcggcttgcggtttatcg
aaacgtaaagcagactatattcttgatcttgctgatcatttcaaggcaaaaagggtcgat
gccgagcaatggcaagagatggaagatgaggacgtcatcgccgatctgacgcaaatcaga
ggcatcggacgctggacagcggagatgtttttgatatttaatttgctccggcccaatatt
ttgcctttggatgacccggggttgcttaaaggcatcagtgtcaattatttttcgggcgag
ccggtttcgcgtagcgatgcacgcgaggtatctgcaaactgggagccctggcgtaccgtg
gcaacgtggtatctttggcgtagtctggatccggtatctacagaatatcaaggcattact
gagtag
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