Collimonas arenae: LT85_2347
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Entry
LT85_2347 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K03746
DNA-binding protein H-NS
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
care03036
]
LT85_2347
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_2347
Chromosome and associated proteins [BR:
care03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
LT85_2347
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LT85_2347
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HalX
DUF6381
DUF7307
Motif
Other DBs
NCBI-ProteinID:
AIY41505
UniProt:
A0A0A1FCJ9
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All DBs
Position
complement(2628612..2628860)
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AA seq
82 aa
AA seq
DB search
MTTYKELQAQIEQLRKQAEELRQAEIADVIIEIKTKMQEYGITGADLGLMGKKRIMKTSP
AMEAETPAMTPVVEDASAGGEM
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctacaaagagctgcaagcacaaatcgaacaattgaggaaacaggcagaagaa
ttgcgtcaagctgagattgctgacgtcatcatcgagattaaaacaaaaatgcaggaatac
ggcattaccggagcggacctgggtctcatgggcaagaaacgcatcatgaaaacctcgccg
gcgatggaagcagaaacgccggcgatgacacctgtcgttgaagatgcgtcggctggcggc
gaaatgtaa
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