Collimonas arenae: LT85_2354
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Entry
LT85_2354 CDS
T03512
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
care
Collimonas arenae
Pathway
care03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LT85_2354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
care03021
]
LT85_2354
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_2354
Enzymes [BR:
care01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LT85_2354
Transcription machinery [BR:
care03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LT85_2354
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LT85_2354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AIY41512
UniProt:
A0A0A1FF86
LinkDB
All DBs
Position
complement(2634655..2634858)
Genome browser
AA seq
67 aa
AA seq
DB search
MARITIEDCLKQIPNRFQLTLSATYRARQLLQGHTAKIDAKDKPTVVALREIAAGKIGIE
MLKKVPG
NT seq
204 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatcactatcgaagattgtttgaaacagatccctaaccgttttcagctgacc
ctgtccgcgacctatcgtgcgcgccagctgttgcaaggccacaccgcaaaaatcgacgca
aaggacaagccaaccgtggttgccctgcgcgaaatcgctgccggcaagatcggcattgaa
atgctcaagaaggtacctggttaa
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