Collimonas arenae: LT85_2402
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Entry
LT85_2402 CDS
T03512
Name
(GenBank) Tetracycline-efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_2402
01504 Antimicrobial resistance genes [BR:
care01504
]
LT85_2402
Transporters [BR:
care02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LT85_2402
Antimicrobial resistance genes [BR:
care01504
]
Gene variants
Tetracycline resistance genes
Transporters
LT85_2402
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
MFS_1_like
MFS_3
PUCC
Motif
Other DBs
NCBI-ProteinID:
AIY41560
UniProt:
A0A0A1FCP6
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Position
complement(2695824..2697110)
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AA seq
428 aa
AA seq
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MTTSSTETQHKARTAAMPFIMLTVLIDMISIGLIVPVLPALVGKFAGSQADTAFWYGAVA
FAFGLANFFGAPILGALSDKYGRRPILLLGFCGLALNFFATAFSTALWMLIVVRLVGGAM
QANAAVCNAYVADITPPEQRAKRFGMIGAMFGVGFIIGPVMGGLLGAINLRLPFIVAGSL
ALTNLAYGYFVLPESLPVDRRRSFSWKFANPLSSLQALSRLKTVGPLVAVIACSGLAQFV
LFTTWVLYTTFKFDWGPLQNGQSLAAVGIMSVLVQGVLLGQMLKRLSPQRLAIIGLLSST
AAYLLWGVASHGWMMYAIIFANIFGPTVNAAIQSIISGAADSHNQGQTLGAVSSLNSLMA
VVAPVIGAPLLGAVSSLPKGDWRIGAPFYFCAALQLASLVLAFLHFQRQRQPSEDTTILT
STPETEDV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacttccagcaccgagacgcagcacaaggcccgcaccgccgccatgcctttcatc
atgctgacggtattgatcgacatgatttcgatcggcctgatcgtaccggtgttgccggcg
ttggtcggcaaattcgccggctcgcaagcggatacggcattctggtatggcgctgtggcg
tttgcgttcggcctggcgaatttcttcggcgcgccgatcctgggtgcactgtctgataaa
tatggccggcggccgatattgctgctggggttttgcgggctggccttgaattttttcgcc
accgctttttcgaccgcactgtggatgttgatcgtggtgcgcctggtgggcggcgccatg
caggccaatgcggcggtgtgcaatgcctacgtggcggacatcacgccgccggagcaacgc
gccaagcgcttcggcatgataggcgcgatgttcggcgtcggcttcatcatcggtccggta
atgggcggtttgctgggagcgatcaatttgcgcctgcctttcattgtcgccggcagcctg
gcgctaaccaacctggcttacggctattttgtgctgccggaatcgctgccggtcgaccgc
cgacgcagcttcagctggaaattcgccaatccgctgtcatccctgcaggcattatcgcgc
ctgaagacggttggccccttggtggcagtgattgcctgtagcggccttgcccaattcgtc
ttgttcaccacctgggtgctgtacaccacgttcaaatttgactggggtcccttgcaaaac
ggccagtcgctggctgcggtcggcatcatgtcggtgctggtgcaaggcgtgttgctgggt
caaatgctcaaacgtctcagcccgcagcggctggcgatcatcggcctgctgtcgtcgact
gccgcctatctgttgtggggtgtagccagtcatggctggatgatgtacgccatcattttc
gccaacatcttcggccccacggtcaacgctgcaatccagagcatcatttccggtgcggcg
gactcgcataaccagggccagacgctaggcgcggtcagctcgctcaacagcttgatggcg
gtggttgcgcctgtcatcggcgcgcccttgctgggtgcggtatcgagcctgccaaaagga
gactggcgcatcggcgcgcccttctatttttgcgcggcgttgcagttagcatcgctggtg
ctggcgttcctgcacttccagaggcaacgccagcctagtgaggacacgacaattcttacc
agtacaccggaaacagaagacgtttga
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