Collimonas arenae: LT85_2415
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Entry
LT85_2415 CDS
T03512
Name
(GenBank) Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_2415
Transcription factors [BR:
care03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LT85_2415
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
DUF2089
wHTH-HSP90_Na-assoc
HTH_AsnC-type
YdaS_toxin
HTH_8
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIY41573
UniProt:
A0A0A1FA04
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Position
complement(2709803..2710726)
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AA seq
307 aa
AA seq
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MNTLSDLAFFAMLVKAGSLAAMARELGVTPPAVTKRLANLEHRLGVRLLNRTTRTMSVTH
EGEIYLADGARILADIEALERTIGRSRAVPKGLLRINASFGFGRKHIGPAISDFSKRFPE
VEVQLLLSERPLNLADQAFDIGIRIGELPDARIIARKIASNKRLLCAAPAYLKQHPEPTM
PRELQTHACIVLRENDAAYGTWHLSRGKRQETVKVRGALSSNDGETVLQWALDGHGILMR
SEWDTAPYLRSGRLREVLTDWTLPSSDIFVVYPERLNLSAKVTAFVDFIADRFKSHLLPS
KDQQHTW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgctctccgatttagccttctttgccatgctggtaaaggccggcagcctcgcc
gcaatggcgcgcgaacttggcgtcacgccgccggccgtcaccaaaagactggcgaacctg
gaacaccgtctgggcgtgcggctgctgaatcgcaccacgcggaccatgagcgtgacgcat
gagggagaaatctacctggctgacggcgcccggatactggctgacattgaagcgctggaa
cgcactatcggcagaagtcgtgctgtacccaagggcttgttgcgcatcaatgccagtttc
ggcttcggccgcaaacatatcggccccgccatatcggatttcagcaagcgctttccagag
gtggaagttcagctcttgctatcggagcggccgctgaatcttgccgatcaggccttcgat
atcggcatccgtatcggcgagttgccggatgcgcgcatcatcgcacgcaaaatcgcctcc
aataaaagactactgtgcgcggcgccagcctatctgaaacaacatcccgaaccgaccatg
ccgcgcgaactgcaaacccacgcatgcatcgtcctgagagaaaacgacgcagcttatggc
acctggcatttaagccgcggcaagcgccaggaaaccgtcaaggtacgtggcgccttaagt
agtaacgatggcgaaacggtcttgcaatgggcgttggatggacacggcatattgatgcgc
tccgaatgggataccgcgccgtacttgagatccgggcgattacgtgaagtgctgaccgac
tggacgcttccttcgtccgatatcttcgtggtctatcccgagcgtctgaacttgtcagcc
aaagtcaccgcttttgtcgatttcattgcggatcgttttaaatcgcatcttttgccgtcg
aaagatcagcagcatacttggtaa
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