Collimonas arenae: LT85_2524
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Entry
LT85_2524 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K22486
transcriptional regulator HilA, main transcriptional regulator of SPI1
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_2524
Transcription factors [BR:
care03000
]
Prokaryotic type
Other transcription factors
Others
LT85_2524
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_CcmH_CycH
Trans_reg_C
TPR_16
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
AIY41682
UniProt:
A0A0A1FFR4
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All DBs
Position
2833097..2834491
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AA seq
464 aa
AA seq
DB search
MSTVVEKINMQTRYRGTTDIDPVSVGFKVDQDGLIFYKNSLLYFPPKERGVFRLLLQAWP
GTVSKEDFAHGVWAGHMSDESLARCITQLRRMLSHLGTIQIDSLYGRGYRAIILPDQANP
PKISPPSVHSRMLETARIQPALAEACNYAQQLLAHCSLETLTQAESILIKVISQAPGYMA
AKLTLAQCMADKINYGVEVEQSLIDDGLALLESMHLAAPQTPGLQSQIAHLLDSKWHFDV
ARLRHQQALRMSSNDALTYFHYGQHLLAINAPLEAVDAFDTARELNPFSPNISVMLARAS
SLASGDPVSAVAQARSTYTSHPESPQAYMYLLSTLALMDPQPETAYAARQLAVTRSSWAG
ASGMISYALARCGDRTGALEIIAAQSKENAGTRVMHGAALIALGLVDEAMARVKEAASLG
CGSLPILLNALEYAPLKQHPEYPSVHEKVFFYLPKKQKQKQKLN
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagttgtagaaaaaataaacatgcagacccgatatcgcggaacgacggatata
gatccggtctccgtgggattcaaggtagatcaagacggtttaatcttctacaaaaattct
ctgctctattttcctccgaaggaacgcggtgtttttcgactattgcttcaagcgtggccg
ggaaccgtttcaaaagaggattttgcccacggtgtatgggccggtcacatgtcagatgaa
agtctcgcacgctgcataacacaactgcggcgcatgctttcccatttaggcacgatacag
atcgactctctttacggtcgaggatatcgcgcgataattttgcctgatcaagcgaatccc
ccgaagatttcgccgccatccgtacattctcggatgcttgaaacggcaagaattcaaccc
gcattggcggaggcttgcaattacgcgcaacaattgctcgctcattgctcattggaaacg
cttacccaggcagaatcaatactgataaaggtcatttcccaggcgcctggatacatggcc
gcaaaactgacgttagcacaatgcatggccgacaaaattaattacggcgtggaagtggag
caatcattgatcgacgatggcctggcgttgctggaatcgatgcatcttgctgcgcctcag
acgccaggtttgcaatcgcaaatagcgcatctgcttgacagcaagtggcacttcgatgta
gctcggctcaggcatcagcaagcgttgcgcatgtcgtccaatgacgctctcacttatttt
cattacggccagcatttattggcaatcaatgccccacttgaagcagtagacgcgtttgat
actgctcgcgaactgaatccattctcgccaaatatatccgtgatgctagcgcgcgcgtcg
tctcttgctagcggagatccggtaagcgctgtggcgcaagcccgtagcacctatacatcg
catccagaaagtccacaagcctatatgtatctgttgagtacgttggcattgatggatcca
cagcctgaaactgcctatgcagcgcgtcaattggcggtaacccgctcatcatgggcaggc
gcatccggaatgatttcctacgcacttgcacgttgcggtgatcgtaccggtgcattggaa
attattgcagcgcaatcgaaggaaaatgccggcacccgtgtaatgcatggggcagccttg
atcgctctagggctggttgacgaggcaatggcacgggtaaaggaagccgccagcctgggt
tgtggatcattgccaatcttactgaacgcattggaatacgcgccgcttaagcaacatcca
gaatatccttccgtgcatgaaaaagtgtttttttatcttccgaaaaaacaaaagcaaaag
caaaagctgaactga
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