Collimonas arenae: LT85_2532
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Entry
LT85_2532 CDS
T03512
Name
(GenBank) Alfa-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
care
Collimonas arenae
Pathway
care00946
Degradation of flavonoids
care01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
LT85_2532
Enzymes [BR:
care01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
LT85_2532
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
AIY41690
UniProt:
A0A0A1FD37
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Position
2855801..2858857
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AA seq
1018 aa
AA seq
DB search
MIVAIVALAVHSLCLAINLPEEEGVLITSTSVEYSSNPLGIDNPRPRLSWILGSDERNQK
QSAYQVKVASSLPLLARPDIWDSGKVDTDQSVLVPYGGPPLLSRTRYYWTVRVWDSHGHT
SAWSKPSWWEMGLLSEQDWHAQWIGLDRPLALPTELSKYNVPALLTQGRTQGQSFISDKP
FTSAAALIPTFVTTNSGMTLSLYLGGPDGHLIASQRFDNHPDNAWATLKLDKPALPGKYY
LEESDPTGQIGWWSYDRGGYSYGKAYADGKPTAGNRKIRWDVTASQTKEDISPQLRKEFL
ATKEIKAARLYVTALGLYQAEINGHRVGIDFLAPGWTNYNKRVQYQTYDVTDFVHPGENA
IGVTLAPGWYAGNIGSFGPGQYGPMPYLLSQLELSYSDGSIERIVTDNSWKSKIGPIVYS
DLIMGEHYDARNETPGWSLPNFDDTEWKVVAVKQDVRTRLVAQVDPPVRIERELKPVAIT
EKKPGMYIFDLGQNMVGTVKLRVSGKAGQVISIRHAEVLNSDGTLYTANLRTAKATDVYI
LKGMGVEVFEPSFTFHGFRYVEVTGSDIQPEIIGRVLHTAAPFTMSFTTNVPMLNQLQSN
ITWSQRGNFLSTPMDTPARDERLGWTGDIAAFAGTATYNMESARFLSKWLTDLRDTQSPK
GAFANVAPNVDGLGIGEAEAGWGDAGVTVPWILYERYGDLQILEQNFDAMTKWLLYLKEN
STDYLRPETGYGDWLNINDETPKDLIATAFFAHSAAIVAKAARILGKDPAPYEELFAKIR
NTFNSSFVLTDGKLVSDTQTAYVLALSMDLLPTSLRKSAADRLVDLIKNKDWHLATGFLG
TPQLLFALSENGYTDVAYRLLLQTSFPSWGYQIDKGATTMWERWDSIKPDGAFQDESMNS
FNHYAYGSVGEWMYQNIAGIRLGSPGFQKIVIRPSPDDKVRNANSRYDSPYGPIEVRWME
DGEHLSLDASIPVNTDAEIWVPTLKKRKIKGDGAQFLYEKDSYTVYQAGSGQYHFSVR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgtggccatcgttgctttggccgtgcattcgctttgcctagcaatcaaccttccc
gaagaagaaggcgttttgatcacgagtacatcagtcgaatatagctctaatccccttggc
attgacaatccgagaccaagactgagttggattctcggctccgatgaacgtaatcaaaag
cagagtgcctatcaagtaaaagtggcgtcgagtttgccattacttgcacggccagacatt
tgggatagcggaaaagttgatacggatcagtcggtattagtgccgtatggcgggcccccg
ttactatcacggactagatattattggactgttcgggtgtgggattctcacggacatact
tctgcgtggagcaaaccgtcatggtgggaaatgggattattgtcggagcaggattggcat
gctcaatggatcggacttgatcgccctctagcacttcccaccgagctgagcaaatacaac
gtacctgcgctactcacgcaaggccggacgcaggggcaaagcttcatctcagacaaaccg
tttacttcggctgctgcgctcatccctacatttgtcacaacgaattccggtatgactctt
tcattgtatttgggagggccggatggtcatttgatagcaagtcagcgctttgacaatcac
cctgacaacgcatgggcgacactcaaacttgacaagcctgctttgcctggcaagtattat
cttgaggagtctgatcctactggccagattgggtggtggagttacgatagagggggctat
agctatggtaaagcctatgctgatggcaaaccaaccgcaggaaatcgcaagatccgttgg
gatgtcacggcctcgcaaaccaaagaagatattagcccgcagttgcgtaaggaattcttg
gcaactaaagaaatcaaggctgccagattatatgtgactgcgcttggattgtatcaggcg
gagatcaatgggcatcgggtaggaatcgacttccttgcgcccgggtggaccaattataac
aagcgcgtccagtaccaaacctatgatgtcactgattttgttcaccccggggaaaacgct
atcggcgtcactctcgcaccaggctggtacgcaggaaacattggatcgtttggccctggt
caatatggacccatgccatatcttttaagccaattggaattgagctattcagatggcagc
attgaacggatagttaccgacaatagctggaagagcaagataggaccaatcgtttattct
gacctcattatgggagagcactacgatgctcgcaacgaaactcccggatggagtttacca
aatttcgatgataccgaatggaaggttgttgcggtcaagcaggacgtgaggactcggcta
gttgcccaggtcgatccccccgtccgtattgagcgcgaacttaagccggtggcaatcacc
gagaaaaaacctggcatgtacatctttgacctgggccaaaatatggtcggaactgtgaaa
ttacgcgtttcgggaaaggcggggcaagtgatttcgattcgccacgcagaagtactaaat
agcgacggcaccttatacactgccaatcttcgcacagcaaaagcgactgatgtttatatt
ttgaaaggaatgggtgttgaggtttttgagccgtcatttacttttcatggtttccgttat
gtcgaagtgacgggctctgatattcaaccagaaattatcggtcgcgtattgcataccgcc
gcgcccttcaccatgtccttcacaaccaatgtgccgatgttgaaccaactgcaaagcaac
atcacatggagccagcgcggtaattttctatcgactccgatggatactccggcgcgcgat
gagcgacttggatggaccggtgatatcgctgcttttgctgggacagcaacttacaatatg
gaatcagcaagatttctcagcaaatggctaaccgatcttcgggatactcagtcacctaaa
ggagcctttgcgaatgtagcgccaaatgtggacgggcttggcataggcgaagccgaagca
ggttggggggatgctggtgtaacagtcccgtggatcctatatgagcgctacggggatcta
caaatacttgaacagaattttgatgccatgacgaaatggcttttgtatctgaaagaaaac
agcaccgactatctgaggcctgaaactggatatggggactggcttaatatcaacgatgaa
acacctaaagacttaatcgccacagcatttttcgcccatagtgccgcaattgttgctaag
gccgcacgcattctgggaaaggatccagctccctatgaagagttattcgcaaaaatccgt
aatacgtttaatagctccttcgtccttacggacggaaaactcgtaagtgatacccaaact
gcttatgtgttggctctatctatggatcttttaccaacttcattgcgaaagtcagctgcc
gaccgcttagtcgacctgataaaaaacaaagactggcacttagccactggattccttggc
acgccgcagctgctgtttgcgctttcggaaaacggttatacggatgtcgcctatcgactg
cttctacagaccagctttccttcttggggttaccagatcgataaaggtgccacaacgatg
tgggagcgatgggactcgattaagccagacggagcgtttcaggacgagagtatgaattcc
tttaatcactacgcatatgggtccgtcggtgagtggatgtaccaaaacatagcaggaata
cgtcttggtagcccaggctttcagaagatcgtcatcagacctagtcccgatgataaggtg
cgtaatgccaatagtcgatatgactcaccgtatggcccgatagaagttcgttggatggaa
gacggggagcatttaagtctcgacgcaagcatcccggtcaatactgatgccgaaatctgg
gttcctactctgaaaaagcggaagatcaaaggggatggtgcgcaattcctttatgagaag
gacagttatacggtctatcaggctggctcaggacagtatcatttttcagtgcgctga
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