Collimonas arenae: LT85_2851
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Entry
LT85_2851 CDS
T03512
Symbol
oppA
Name
(GenBank) Oligopeptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
care
Collimonas arenae
Pathway
care02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
care00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT85_2851 (oppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_2851 (oppA)
Transporters [BR:
care02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LT85_2851 (oppA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIY42009
UniProt:
A0A0A1FEC1
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All DBs
Position
3189764..3191347
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AA seq
527 aa
AA seq
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MLQFSRKKMLGLAFAGLSALVSLSPAAGYAADLKIGLYADVSTLDPHFNNLAPNISLSSH
LFDALVNVDANGHLIPGLATSWKAIDQLTWEFKLRHGVKFSDGSNLTAEDVVFSLDRPAT
LTNSPGPFTSYTKQIISKQVVDPYTVRLKTATPYGPLALDVSTIFIVSKKAAQNATTDDF
NSGKALVGTGPFKFASFKRGDRIELVRNDVYWGEKPAWDKVTFRILTSDGARLAALLAGE
VDAIENVPPADLAKLKTNPKFTLAQKISWRTLFWTLDQSRDKSPDITDKNGKPLDKNPLK
DVRVRQAISKAINRQALVDRTLEGLAVPASNIVAPGILGYADTLKVEKYDPEGAKKLLAE
AGYPNGFGITLHGPNNRYINDERVVQTVAQFLNRVGIQAKVETLPLAVYFGKARAGEYSA
ALLGWGTLAGDFGLRTLLGTTNPDTGWGSWNWGKYSNPKLDQLVQSSLASVEQKQRQDFA
RQGAVLALNDYALIPLYHQYATWALRKGLKYTPRTDEFTFAYQFHPE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagttttccagaaagaaaatgctcggcctggcctttgccggcctgagcgccctg
gtgtctttgagccctgcggccggctacgccgctgatctgaagatcggattatatgccgat
gtatccaccctggatccgcacttcaataatctcgcgccaaatatctcgctttcatcgcat
ttgttcgatgccttggtaaatgtggatgccaacggccatttgattcctggcctggcgact
tcctggaaggcgatcgatcagctgacctgggagttcaagctgcgccatggcgtcaagttc
agcgacggctccaacctcactgcggaagatgttgtgttttcgctggaccggcccgccacc
ctgaccaacagcccgggaccatttaccagttacaccaagcaaattatcagcaagcaggta
gtcgacccatatacagtacggctgaaaaccgccacgccatatggtccgctggcgctggac
gtcagcacgattttcatcgtctcgaagaaagccgcgcaaaacgccacgaccgacgatttc
aacagcggcaaggcgctggtcggcaccgggcctttcaaattcgccagcttcaaacgcggc
gaccgtatcgaactggtgcgcaacgatgtctattggggtgagaaaccagcatgggacaaa
gtcaccttccgtatcctgacctcggacggtgcgcgcctggcagccttgctggcgggtgaa
gtcgacgctatcgaaaatgtcccgcccgccgacctggccaaactgaaaaccaatccgaaa
ttcacactggcgcaaaaaatatcctggcgcaccctcttctggaccctggaccagtcgcgc
gacaagtcacctgacattaccgataaaaacggcaaaccgctggacaagaatcccttgaaa
gacgtgcgcgtgcggcaagccatttccaaggcgatcaatcgccaggccctggtcgaccgt
accctagaaggattggcagtgccggcttcgaatatcgtcgcacccggtatcctgggctat
gccgatacattgaaagtggaaaaatacgatcctgagggcgccaagaaactgctggcggaa
gctggctatccaaacggcttcggcatcacgttgcatggtccgaacaatcgctacatcaac
gatgagcgcgtagtacagacggtggcgcaattcctgaaccgggtcggaatccaggccaag
gtggaaacactgccgctggcggtctacttcggcaaggcgcgtgctggcgagtacagtgcc
gcgctgctaggctggggcacgctggccggcgatttcggcttgcgcaccctgctcggcacc
accaacccggataccggctggggctcctggaactggggcaagtacagcaacccgaaactg
gatcagctagtgcaatcgtcgctggcttcggtagagcagaagcaacgccaggattttgcc
cgccagggcgccgtgctggcactcaacgactacgcgctgattccgctgtatcaccaatac
gcgacctgggcactgcgcaaggggctgaagtacacgccgcgtacggatgaatttacattt
gcatatcagtttcatcccgaataa
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