Collimonas arenae: LT85_3238
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Entry
LT85_3238 CDS
T03512
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_3238 (msbA)
Transporters [BR:
care02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LT85_3238 (msbA)
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GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_21
ABC_ATPase
AAA_29
AAA_30
Zeta_toxin
AAA_25
RsgA_GTPase
TsaE
AAA_14
NACHT
MMR_HSR1
AAA_23
NB-ARC
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AIY42396
UniProt:
A0A0A1FD11
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Position
3647478..3649178
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AA seq
566 aa
AA seq
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MASIALLVAAGATLAIPYAFRQMIDLGFSTGGIQGASHIDMYFLALFGVACVLGVATAAR
FYMVSWLGERVTADLRSAVYSHVVTQSPQFFETTKTGEVLSRITTDTTLIQALVGTSISM
ALRNALLFIGGMVMLFITSVKLSAIILVMLALVVLPIVWYGRRVRKLSRDSQDRVADASA
MAGEILNAMPTVQAFTHENIEARRFDISIENAFSTAMARIRARSLLTMMAILLVFGAIVF
VLWLGAHAVVQGRMSGGELGQFILYAALLAGSIGALAEVMGDAQRAAGATERLLELLAAQ
SPVQSVLLPDSLPPRTAQGAALTLANIGFRYPSRPESAALHGLSLDIRPGETVAVVGPSG
AGKTTLFQLLLRFYDPQEGSIKLDGVDIKYLDLHTLRGAIGIVPQDTIIFSANAMENIRY
GRVDATDAEVIAAAKMAAAHEFIERLPEGYKAFLGERGVRLSGGQRQRIAIARALLKNPP
LLLLDEATSALDAESERAVQGALEAAMVGRTTLVIAHRLATVQRADRIIVLEHGHVVETG
NHAELVAQNGLYASLAALQFNIHADS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggccagtattgcgctgctagtggcggccggcgccaccctggcgattccctacgcgttc
cggcaaatgatcgatctcggcttcagcaccggcggcatccagggcgccagccatatcgac
atgtatttcctggcgctgttcggcgtcgcctgcgtcctgggcgtggccacggcggcgcgc
ttctatatggtgtcctggctaggcgagcgcgtcactgccgatctgcgcagcgcagtgtat
tcgcatgtggtgacgcaaagcccgcaattcttcgaaaccaccaagaccggcgaagtgctg
tcgcgcatcaccaccgacaccacgctgatccaggcgctggtcggcaccagtatctcgatg
gcgctgcgcaatgccttgttgttcatcggcggcatggtcatgttgttcattaccagcgtc
aagctgagcgcgattatcctggtgatgctggcgttggtggtgctaccgatcgtctggtat
ggccggcgcgtacgcaagctgtcgcgcgattcgcaagaccgggtcgccgacgcctcggcc
atggccggagaaatcctcaacgccatgccgaccgtgcaggccttcacccatgagaatatc
gaggcgcgtcgcttcgacatctcgatcgaaaatgctttcagcaccgcgatggcgcgaata
cgcgcccgttcgttgctgaccatgatggcgatcctgctggtgttcggcgccatcgtattc
gtgctgtggctaggcgcccatgcggtagtccaaggccgcatgagcggcggcgagctgggc
cagttcatcctttacgcagccctgctggccggctctatcggcgccctggcggaagtcatg
ggcgacgcccagcgcgccgccggcgccactgaacgcctgctggaattactggcggcgcaa
tcgccggtgcaatcggtgctgctgcccgattcgctgccaccacgcacggcgcaaggcgcg
gcgctgacactggcgaatatcggcttccgctatccgtcgcggcctgagagtgccgcgttg
cacggcttgtcgctggatatccggccaggagaaacggtggctgtggtcggtccttccggc
gctggcaagaccaccctgttccaattgctgctgcgcttctacgatccgcaagaaggcagt
atcaagctcgacggcgtcgacatcaagtatctcgacctacatacattgcgcggagccatc
ggtatcgtgccgcaagacactattattttctccgccaatgcgatggaaaacatacgctat
ggccgcgtcgacgcaacagacgctgaagtgatcgctgcagcaaaaatggcggcggcgcac
gaattcatcgaacgcctgccggaaggctacaaggctttcctcggcgagcgcggcgtgcgt
ttgtcgggtggtcagcgccagcgcatcgcgattgcccgcgccttgctaaaaaatccgccg
ctgctgttgctggatgaagccaccagcgcgctcgatgccgaatcggaacgcgcagtgcaa
ggcgcgctggaagcggcgatggttggccgtacgacgctggtgattgcacatcgtctggcg
actgtgcaacgtgctgaccgcatcatcgtgctggaacatggccatgtagtcgaaaccggc
aaccacgccgaactggttgcgcaaaacggcttgtacgccagcctggcggcgctgcaattc
aatatccatgccgattcgtaa
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