Collimonas arenae: LT85_3336
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Entry
LT85_3336 CDS
T03512
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
care
Collimonas arenae
Pathway
care02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT85_3336 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_3336 (msbA)
Transporters [BR:
care02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LT85_3336 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_29
AAA_22
AAA_16
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AIY42494
UniProt:
A0A0A1FFP6
LinkDB
All DBs
Position
complement(3753479..3755359)
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AA seq
626 aa
AA seq
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MFGWFERLLHPYPDTVMTPPPRGFFAFVWACTKGLRPYIIAMTLLTAITGAFEALLFAMM
GRIVDWLGKAEPSTLWTHQSTNLLLLAAILLASPIVVALQSMFKQQALAGNFPMLLRWKF
HRLMLNQSMHFYQDEFAGRVATKVMQTSLAVRDVCMILCDILVFVVIYFFTMVAVVGSFS
GWMLVPFLGWLTLYTLALRYFVPRLSKVAKTQADARSLMTGRITDAYTNIATVKLFSHAG
REAGYARSAMQEFLQTVHGQMRLVTSFEIVNHTLSMLLILSTAGAALWLWTQGQVGIGAV
AAATAMALRLNGISHWVMWEFASLFEQVGTVQDGINTLSRPHAVLDQADAKRLKVSQGKL
DFEQVGFAYGGQRPVIDHMSLHISPGEKIGLVGRSGAGKSTIVNLLLRFYDVEQGHILID
GQDISHVTQDSLRAQVGMVTQDTSLLHRSVRDNLLYGRPDATDADMLAAAKRAEAHEFIL
TLTDPKGRTGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAI
QASLYRLMEGKTVVAIAHRLSTIAAMDRLIVLDKGRIVEQGDHRSLLEQGGLYARLWAHQ
SGGFLGEEADDDAPAATMGGAQTELA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttggtttgaaagactgttacatccttatccggatacggtcatgacgccgccg
ccgcgcggattttttgcgttcgtctgggcctgtaccaagggtttgcgcccgtacatcatc
gccatgaccttgctgaccgccatcaccggcgccttcgaggctttgctgtttgccatgatg
ggacgcatcgtcgattggctcggcaaagctgaaccgtcgaccctgtggacgcaccaaagc
actaatttgctgttgctggcggcgatactgctggccagcccgatcgtggtcgccttgcaa
agcatgttcaagcaacaggcgctggcgggtaatttcccgatgctgctgcgttggaagttt
caccgtctgatgctcaaccaaagcatgcatttctatcaagacgagttcgccggccgggtc
gccaccaaagtcatgcagacttcgctggcagtgcgcgacgtctgcatgatcctgtgcgac
atcctggtgttcgtggtgatttatttcttcaccatggtggcggtggtaggcagctttagc
ggctggatgctggtgccgttcctgggctggctgacgctgtatacgctggcgttgcgttat
ttcgtgccgcgcctgagcaaggtcgccaagacccaggccgatgcgcgttcgctaatgacc
ggccgcattaccgatgcctataccaatatcgcgacggtcaagctgttttcacacgcaggc
cgcgaagctggctatgcgcgttcggcgatgcaggaattcttgcaaacggtgcatggccag
atgcgtctggtgaccagttttgaaatcgtcaaccacaccctgagcatgctgctgatcctg
agcacggccggcgcagcgctttggctctggactcaagggcaagtcggcattggcgcggtt
gccgcggcgaccgccatggccctgcgtttgaacggcatttcgcattgggtgatgtgggag
tttgcgtccttgttcgagcaggtcggtacggtacaggacggcatcaataccttgtcgcgc
ccgcatgcagtgctggaccaggctgacgccaagcggctgaaagtcagccagggaaaactc
gatttcgagcaggtcggctttgcctacggcggacagcgtccggtgatcgaccacatgtcc
ttgcatatcagccctggagaaaagatcggcctggttggccgttccggcgcaggcaaatcg
accatcgtcaatttgctgctgcgtttctacgatgtcgagcagggccatatcctgatcgat
ggccaggatatttcccatgtcacgcaggatagcttgcgggcgcaggtcggcatggtgacg
caagatacttcattgctgcatcgttcggtacgcgacaacctgctgtacggccgtcctgac
gccaccgatgccgacatgctggcggctgcgaagcgggcggaagcgcatgagttcatcctg
actttaaccgatcccaaaggccgcacaggctacgatgcacacgtcggcgaacgcggcgtc
aagctttccggcggccagcgccagcggattgcgattgcccgcgtgatgttgaaagacgcg
ccgatcctgctgctggacgaagcgaccagcgcgctagattcagaagtcgaggcagccatc
caggccagcttgtaccggctgatggaaggcaagaccgtagtggcgattgcccaccgcttg
tcaaccattgcggcgatggatcgtttgatcgtgcttgacaagggccgtatcgtcgagcag
ggcgatcatcgcagcctgttggagcagggcggtttgtatgcgcgtttgtgggcgcaccag
agcggtggtttcctgggtgaagaagcggacgacgacgcacccgcagcgaccatgggcggc
gcgcaaacggaactggcttag
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