Collimonas arenae: LT85_3399
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Entry
LT85_3399 CDS
T03512
Name
(GenBank) Gene D protein
KO
K06905
Bacteriophage probable baseplate hub protein
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
LT85_3399
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Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
Motif
Other DBs
NCBI-ProteinID:
AIY42557
UniProt:
A0A0A1FI34
LinkDB
All DBs
Position
3829372..3830631
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AA seq
419 aa
AA seq
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MLRAQGNVANIIKDVNDTALGAVIYIQRDALNAARELNITLSDTDGQLAIPPKGARINVQ
IGWADSGLVDKGIFTVDEIEHSGAPDVLTLRARTASLIDTFREVREDSYSNTTLGAIIEL
IAFKQQLMAGVSDALRNIPVKHIDQTRESDAAFLRRLGKKYDAAATVKNDTLIFVPAGRS
KTASGQDLPVIQITRQLGDNHRFHSAERDSYSGVRVFWYDEKHSMRRSVVAGLPGNSKRL
RTTYADEADARTAALAEWGRIQRGTSSFELSLALGIPALMPQSPVTVMGFKAAIDSMDWL
ASKVTHSIGDAGFTTRIELETRTEEAEVEREDEVDPDPGITGVIAKWRNAVTKKSGQEIA
PLTGTGKHVKPLAGATANPKTLQHVYASKQTARRAAQGEWEHIVARRDIIKENNDGRFS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgcgcccagggcaacgtcgccaacatcatcaaggacgtcaatgacaccgccctt
ggcgcggtgatctatatccagcgtgacgccctgaacgcggccagggaactgaacatcacc
ttgtccgatacggacggtcaactcgccataccgccgaagggtgccagaatcaatgtgcag
atcggctgggccgattccggcctggtcgacaaaggcatctttaccgtggatgagatcgag
cacagcggtgcgccggatgtgctgaccttacgcgcccgcacggcaagcctgattgatacc
ttccgtgaggtacgcgaggacagttacagcaacaccaccctgggcgccatcatcgagctg
atcgcattcaagcaacagctcatggccggcgtctccgatgcgctgcgcaatatccctgta
aaacacatcgaccagacccgcgagagcgacgccgccttcctgcgccgtcttggcaaaaaa
tacgatgcggccgccaccgtcaaaaacgacaccttgatctttgtgccagcgggccgcagc
aagaccgcctccggacaagatttgccggtgatccagatcacacgccagctaggcgacaat
caccgcttccacagcgccgagcgtgacagctacagcggcgtgcgcgtgttctggtatgac
gaaaagcacagcatgcgccgaagtgtcgtggcaggattgccaggcaacagcaagcgacta
cgcaccacctatgccgacgaagccgacgcccgcaccgcggcgcttgcagaatggggccgt
atccagcgcggcacatccagttttgaactatcgctggcactcggcattccggcattgatg
ccgcagtcgccggtaacggtgatgggattcaaagccgcaatcgatagcatggattggctg
gcatccaaggtgacgcatagcatcggtgacgccggctttaccacccgcatcgagctggaa
acgcgcacagaagaagcagaagtcgagcgcgaagatgaggtagatccggatccgggcatt
accggggtgatcgccaaatggcgtaacgctgtcacgaaaaaatctggtcaggaaatagca
ccgctgacaggtaccggcaagcatgttaagccattggccggtgccaccgccaatccgaaa
acactgcaacacgtttatgccagcaaacagactgccagacgcgcagcccagggagaatgg
gagcacattgtggcgcggcgggacattattaaagagaataacgatggccggttcagctaa
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