Collimonas arenae: LT85_3434
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Entry
LT85_3434 CDS
T03512
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
care03009
]
LT85_3434
Enzymes [BR:
care01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
LT85_3434
Ribosome biogenesis [BR:
care03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LT85_3434
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIY42592
UniProt:
A0A0A1FI75
LinkDB
All DBs
Position
3869550..3870296
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AA seq
248 aa
AA seq
DB search
MTEPLRLSKRMSELGLCSRREADEWIARGWVRVDGIVVSELGSKVLPSQRISVERQAAAE
QSKRVTILINKPVGFVSGQAEDGYQPAVALIKEANRWSEDSSPTLFHPTQLRSLVPAGRL
DIDSVGLLVLTQDGRIAKHLIGEETSVDKEYLVRVRYTKGDKLPDSDLRRLNFGLTLDGK
KLKPAIVKWQNEDQLSFTLREGKKRQIRRMCDMVGLKVLGLKRVRIGGVKLGNLPEGQWR
YLGADEQF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccactacgcctttccaaacgcatgtctgaactcgggctatgctcgcgccgc
gaggccgatgaatggatcgcgcgcggctgggtgcgggtcgacggtatcgtcgtctccgaa
ctcggcagcaaggtacttcccagccaacgcattagcgtagaacgccaggccgccgccgag
caatcgaagcgcgtcaccattctgatcaacaagccggtaggcttcgtcagcggccaggcc
gaagacggctaccagccggcggtggcattgatcaaggaagccaaccgctggagcgaagac
agctcaccgaccctgttccatccgacccagctacgtagcctggtcccggccggacgcctc
gacatcgactcggtcggtttgctcgtactgactcaggatggccgtatcgccaagcatctg
atcggcgaagaaaccagcgtcgacaaggaatacctggtgcgagtgcgctataccaagggt
gacaaactgcccgacagcgacctgcgccgtctcaatttcggcctgacgctggacggcaaa
aaactcaagccagcgatcgtcaaatggcagaacgaggatcagttgagcttcactttgcgc
gaaggtaaaaaacgccagatccgccgcatgtgcgatatggtcgggttgaaagtactggga
ttgaaacgggtgcggattggcggagtgaagctggggaatttacctgaaggacaatggcgt
tatctgggcgctgacgagcagttctaa
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