Collimonas arenae: LT85_3471
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Entry
LT85_3471 CDS
T03512
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
care03036
]
LT85_3471
Chromosome and associated proteins [BR:
care03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LT85_3471
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIY42629
UniProt:
A0A0A1FG21
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Position
complement(3919064..3922594)
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AA seq
1176 aa
AA seq
DB search
MRLTSIKLSGFKSFVDPTNFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES
MQDVIFNGSSHRKPAGRSSVELVFDNSLGKAAGQWSQYAEIAVKRTLTRDGTSTYYINNQ
AVRRRDIQDIFLGTGLGPRAYAIIGQGMISRIIEARPEELRIFLEEAAGVSKYKERRRET
ENRLNDTRDNLLRVEDILRELNANLEKLQSQAAVAQKFHELQGDQEEKQKLLWLLRKNEA
KAEQEKFFREIEKAQTDLEEQTAKLRHVETELEHMRQSHYAAGDRMHQAQGHLYQTNSEI
GSLEAQIKFVIESRNRLQSQLNSLTAQRDQWQRQGTQFQDDLVEAEMHLEELMARVEQSQ
VASQQHNDQLPALEQRWREAQLKSTESRAKIMQIQQQIELESTHQRNASNILNGLTGRRE
RLSQEKNGLNLPDNAHLTNLRMQLEEKQAGLEEVGMQLEELQEQQPRLEEERRNAQQQVN
TESANNAQLEARLAALKQLQESVQTEGKVQPWLEKHELAALPRLWQKLHIDGGWETALES
VLRERTSALEMSNLDWAKAFFNDAPPAKLALFSPNGVASTAPVDAPAGLKPFLNLLQLND
PGLRVLMQDWLHNFYAADDTVTAFAERGKLPLGASFVTRQGHVISKTGVRFYASDSEQDG
MLARQQEIENITKQLRAQQMLADEARSRSVRAEAALSQATQRLQEMRLRHTGLTQAVHGL
QIDVMKLSELQERFNQRSSQIAADLAEIAAQESEQQQIKMESEAKFEQLDMELAELQEKH
EDGQTDYLGKEQQLNDARQRLREMERAAQEAEFAEKSHRNKIEELKRSIATALEQAAQLF
ANMQQGHLELESLDDQAAQAGLQDLLDKRSEQERALADTRHELDQVSQNLRQHEETRLQA
ERSLQPQRDRIMELQLKEQAARLNQEQYVQQLLEAQADEAALSEKLTSEMRPSYLQGEVT
RLTNAIAGLGAVNLAALDELAQASERKNFLDAQNADLTEAINTLQDAIHKIDKETRDLLQ
DTFDKVNHHFAELFPILFGGGQARLIMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKA
LTATALVFSMFQLNPAPFCLLDEVDAPLDDANTERFCNMVKRMSTNTQFLFISHNKIAME
MAQQLIGVTMQEQGVSRIVAVDMEAARSFASDPVAA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttaacttccattaaattatcgggattcaagtctttcgttgaccctaccaatttc
caggtcccgggccagctggtcggtgtggtggggcctaacggttgcggcaagtccaatatc
atcgatgcggtgcgctgggtcttgggtgaatccaaggcttccgagctgcgcggcgagtcg
atgcaggacgttattttcaacggctcttctcaccgtaagccggctggccgttcttcggtc
gagctggtgttcgacaatagcctcggtaaagctgcgggccaatggagccagtacgccgaa
atcgccgtcaagcgcaccttgacgcgcgacggcacttctacgtattacatcaataaccag
gcggtacgccgccgcgatatccaggatatcttcctcggcaccggactaggcccgcgcgct
tacgcgatcatcggccagggtatgatttcccgcatcatcgaggcgcgccctgaagagttg
cggattttcctggaagaagccgctggcgtgtccaagtacaaggagcgtcgccgcgaaacc
gaaaatcgcctgaacgacacccgcgataacttgctgcgggtcgaagacatcttgcgcgaa
ctgaacgcgaatctggaaaagctgcaatcgcaggctgcggtcgcgcaaaaattccatgag
ctgcaaggcgaccaggaagagaagcagaaattgttgtggctgttgcgcaagaatgaagcc
aaagccgagcaggaaaaattcttccgcgaaattgaaaaggcgcaaaccgacttggaagag
cagaccgccaagctgcgtcatgtggaaaccgagctggaacatatgcggcaatcgcactat
gcggcaggcgaccgcatgcatcaggcgcaaggccatctgtaccagaccaactctgaaatc
ggcagcctggaagcgcagatcaagttcgtcatcgaatcgcgtaaccgcttgcagtcgcaa
ctcaattcattgaccgcgcagcgcgatcaatggcagcgccagggtacgcaattccaggac
gatctggtggaagccgagatgcatctggaagagctgatggcgcgcgtcgaacaatcgcag
gtagcctcgcagcaacataacgatcagttgccggcgctggagcagcgttggcgagaagcg
cagctgaagagtaccgagtcgcgcgccaagatcatgcagatccagcagcagatcgaactc
gaatcgacccatcagcgcaatgcttcgaatatcctgaatggcctgaccggccgccgcgag
cggttgtcgcaggaaaagaacggcttgaacctgcccgacaatgcacatctgaccaatctg
cgtatgcagctggaagaaaagcaggccgggctggaagaagtaggcatgcagctggaagag
ctgcaggaacagcagccgcgtctggaagaggagcggcgtaacgcgcagcagcaagtcaat
acagaaagcgccaataacgcccagctggaagcgcgtcttgccgcgctcaagcaattgcag
gagagcgtgcagaccgagggtaaggtacagccttggcttgaaaagcacgagttggctgca
ttgccgcgcctgtggcaaaaactgcatatcgacggtggctgggaaaccgcgctggagtcg
gtcctgcgcgagcgtacttcggcgctggaaatgtccaacctggattgggcgaaggccttt
ttcaacgatgcgccgccagccaagctggccttgttttcaccaaatggcgtagcgtccact
gcgcctgtcgatgcgcctgccggcctgaaaccgttcctcaatctgttgcagttgaacgat
ccgggtttgcgggtgttgatgcaggactggctgcacaatttctacgctgccgacgatact
gtgacggccttcgccgagcgcggcaaattgccgctgggcgccagctttgtgacgcgccag
gggcatgtgatcagcaagaccggcgtgcgtttttatgcctcggattcggagcaggacggc
atgctggcgcgccagcaggaaatcgaaaacatcaccaaacagttgcgtgcccagcagatg
ctggccgatgaggcgcgttcacgctcggtgcgggccgaagcggccctgtcgcaagccacc
cagcgcttgcaggaaatgcggttgcggcataccggcttgacgcaggccgtgcacggtttg
cagatcgatgtcatgaaattgtccgagttgcaggagcgctttaaccagcgcagctcgcag
attgctgccgacctggctgaaatcgccgcgcaggaaagcgagcagcagcaaatcaagatg
gaatcggaagccaagttcgagcagctcgacatggaactggccgaattgcaggaaaagcat
gaagacggacaaaccgattatctgggcaaggaacagcaactgaacgacgcccgccagcgc
ctgcgtgaaatggagcgggccgcgcaggaggcggagttcgccgagaaatcccatcgcaac
aagatcgaagaactcaagcgcagcatcgccaccgcgctggagcaggcggcgcagttgttc
gccaacatgcagcagggccaccttgaactggaaagcctggacgaccaggcggcgcaagcc
ggtttgcaagatttgctggacaagcgcagcgagcaggaacgcgcattggccgatactcgc
cacgaactggaccaggtctcgcagaatttgcgccagcatgaggaaactcgcctgcaagcc
gaacgcagcctgcaaccgcagcgcgaccgtatcatggagttgcagctgaaagagcaggcc
gcgcgtctgaatcaggaacaatatgtgcagcagctactcgaagcccaggcggatgaagct
gcgctgagcgaaaagctgacatcggaaatgcggccatcgtacctgcaaggcgaagttacc
cgcctgaccaacgccattgccggcctgggtgctgtcaacctggcggcgctggacgagctg
gcgcaggcatccgagcgcaagaatttcctggatgcgcaaaacgctgacttgaccgaagcc
atcaacactttgcaggacgcgatccacaagatcgacaaggaaacccgcgacctgctgcaa
gatactttcgacaaggtcaatcatcactttgccgagctattcccgattctgttcggcggc
ggccaggccaggttgatcatgaccggcgatgaaatcctcgactccggcgtgcaggtgatg
gcgcaaccaccgggcaaaaagaatgcaacgattcatttactatcgggtggtgaaaaggcg
ctgaccgcgacggcattggtgttctcgatgttccagctgaatccggcgccgttctgcttg
ctggacgaggttgatgcgccgctggatgacgccaataccgagcgtttctgcaatatggtc
aagcgtatgtcaactaacacacagttcctgttcatttcgcataataagattgcgatggaa
atggcgcagcagctgatcggcgtgaccatgcaagagcagggtgtgtcgcggattgttgcg
gtggatatggaagcggccagaagttttgccagcgatcccgttgccgcataa
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