KEGG   Collimonas arenae: LT85_3550
Entry
LT85_3550         CDS       T03512                                 
Symbol
impC
Name
(GenBank) Uncharacterized protein ImpC
  KO
K11900  type VI secretion system protein ImpC
Organism
care  Collimonas arenae
Brite
KEGG Orthology (KO) [BR:care00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:care02044]
    LT85_3550 (impC)
Secretion system [BR:care02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LT85_3550 (impC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AIY42708
UniProt: A0A0A1FD85
LinkDB
Position
4002935..4004422
AA seq 495 aa
MSFQHNPAAAASSAAAESGLLDQIVEQSKVAKSGAEHDRAKDIISELVNQVMQGTVVVSA
NLSATIDARVAELDRLISEQVSAVMHAPEFQKLESSWTGLHYLVFNSTTGQNIKIKVLNA
TKRELVKDFQAALDFDQSAVFKKVYEEEFGTFGGSPFGALLGDFEITRQPEDMYFVEQMS
HIAASAHAPFISSASPELFGLETYSELGKPRDLAKVFETVEYAKWKSFRESEDSRYVGLT
LPRFLGRLPFNPKDGQTVEGFNFVEDVDGTDHSKYLWCNAAYAFGTKLTKAFEDFGWCAA
IRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYA
AFFGAQSTQKAKKYNTDSANANSVLSAQLQYIFAVSRIAHYMKSMMRDKIGSFASAGNVE
DFLNRWLTQYVLLDDNASQEQKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELS
VSLRLVAELPASTKS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgtcctttcagcacaatcctgcggcggcggccagctcggccgcggcagaatccggtcta
ctcgaccagatcgtagaacagagcaaggtcgccaagtccggcgcagaacacgaccgcgcc
aaagacatcatttcggagctcgtgaatcaggtcatgcagggcactgtggtggtgtcggcc
aatctgtcggctaccatcgacgcccgcgtggcagaactggaccgtctgatttccgaacag
gtcagcgcagtcatgcacgcgcctgagttccagaaactggaaagcagctggaccggtttg
cactacctggtcttcaactcgactaccggacagaacatcaagatcaaggtcttgaacgct
accaaacgcgaactggtaaaagacttccaggcagcattggatttcgaccaaagcgccgtc
ttcaagaaagtttatgaagaagaattcggcactttcggcggctcgccgttcggcgccttg
ctgggcgattttgaaattacccgccaaccggaagacatgtacttcgtcgaacagatgtcg
cacatcgcagcttctgcgcatgcgccattcatcagttcggcatcgccggaattgttcggc
ctggaaacctacagcgaactcggcaagccacgtgacctggcgaaggtattcgaaaccgtc
gaatatgcaaaatggaaatctttccgcgagtcggaagattcccgctatgtcggattgacc
ttgccgcgcttcctgggccggctgccattcaatccgaaggatggccagactgtcgaaggc
ttcaacttcgtggaagacgtggatggcaccgatcattccaaatacctgtggtgtaacgcc
gcttatgcctttggcaccaagctgaccaaggcttttgaagattttggctggtgcgcggcc
atccgcggcgtcgaaggcggtggcttggtggaagacttgccgacccacactttcaagacc
gacgaaggcgaagttgcgctcaaatgccctaccgaaatcgcgatcaccgaccgtcgcgag
aaagaactgagcgacctcggcttcatctcgctggtacattgcaaaaataccgactacgcc
gccttcttcggtgcgcaatcgactcagaaggcaaaaaaatacaatactgattcggccaat
gccaactcggtactgtcagcccaactgcagtacattttcgccgtatcgcgtattgcgcat
tacatgaaatcgatgatgcgcgacaaaatcggcagctttgcttcggcaggcaacgtggaa
gacttcctcaaccgttggctgacccagtatgtgctgcttgatgacaatgccagccaggag
caaaaggcgcaattcccgttgcgtgaagcttcagtgcaggtatctgaagtaccgggacgt
ccgggcgtctaccgtgcagtatcgtttttgcgcccgcacttccagcttgacgaactttca
gtttcacttcgcttggtcgcagaattaccagcatcaaccaagtcttaa

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