Collimonas arenae: LT85_3555 Help Entry LT85_3555         CDS       T03512                                  Symbol clpB Name (GenBank) ClpB protein   KO K11907   type VI secretion system protein VasG Organism care  Collimonas arenae Pathway care03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:care00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     LT85_3555 (clpB)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:care02044]     LT85_3555 (clpB) Secretion system [BR:care02044]  Type VI secretion system   Imp/Vas secretion system core components    LT85_3555 (clpB) SSDB OrthologParalogGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA Clp_N AAA_5 ClpB_D2-small AAA_16 AAA_22 NBD_SMAX1 nSTAND3 AAA_7 Sigma54_activat AAA_25 ResIII AAA_29 TniB SLFN-g3_helicase T2SSE NACHT Zeta_toxin SRP54 DUF815 ATPase_2 AAA_30 ZW10_C2 Motif Other DBs NCBI-ProteinID:  AIY42713 UniProt:  A0A0A1FD90 LinkDB All DBs Position 4008422..4011121 Genome browser AA seq 899 aa AA seqDB search MSINLKTLISKLNDTSRLAAERAANICVGRGQYEVDIEHLFLALLEQPKSDFAVIAHKCG ISLAALESDLQHEIERFKSGNARTPVFSPHLPKLFEHAWLIASLDNQSGRIRSGHLLLAL LTEPDLVQLAYRGSKLFIKFKLDDLKHDLAKLTEGSQESTIDSNSASTEDDGGDPVQELT TKGEASKTPSLDKFTTNLTQRAREGKVDPVIGRDAEIRQTIDILMRRRQNNPILTGEAGV GKTAVVEGLALRIAQKDVPDVLQGVEVHTLDMGLLQAGASVKGEFENRLKSVIDEVKKSS HAIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALA RRFQVVKVEEPSEELACAMLRGMAPLMEKHFGVRVFDDAITEAVRLSHRYISGRQLPDKA ISVLDTACAKVALGQNATPALIENIVKKLDRLVAELNSLERESNAGGKHAERLKELRELQ STLNAELAIHRERWEKEKALTDRIKAARTELEAIPAAEQTAADDSTKPSKKAAKDSKENQ ELAKLIEELKLLQGETPMVPVQVDGLVVAEIVASWTGIPLGKMVKDEIKTVINLGSLLHE RVLGQPHAIEAVAQRVRTSRANLDDPNKPKGVFLFVGPSGVGKTETALALADVLYGGERK LVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLE LFFQVFDKGVLDDAEGREIDFKNTIIILTSNVASSLIMQSCLNKAAAELPSTDDLEQAIR PQLVKAFKPAFLGRLKVIPYYPISDDVLVEIINLKLGRIQKRIAINHKAEFSYDEPLVEA VLARCTEVDSGARNVDNILNGTLLPEIAETVLAKMAEGGSIAKIKVTANKQGQFKYAIK NT seq 2700 nt NT seq  +upstreamnt  +downstreamnt atgagcattaatctcaaaaccttaatcagcaaactgaacgacacctcgcgcctggcagcg gaacgggcagcaaacatctgcgtcggccgcggccagtatgaagtggatatcgagcatttg ttcctggccttgctggaacagccgaagagcgattttgcggtgattgcgcataaatgcggc atcagcctcgccgcactcgaaagcgatctgcagcatgaaatcgaacgcttcaaaagcggc aacgcccgcaccccggtattctcccctcacctgcccaagttgttcgagcatgcctggctg atcgcctcgctcgacaaccagtccggccgcatccgcagcggccatttgctgctggcattg ctgaccgaaccggatctggtgcaactggcctatcgcggttccaagctattcatcaagttc aagctggatgaccttaagcatgacctagcgaagttgaccgagggctcacaagaaagcact atcgatagtaacagcgcttccactgaagacgacggcggcgacccggtgcaggagctgacc accaaaggcgaagcgtcgaaaaccccatcgctggacaagttcaccaccaacctgacccag cgcgcgcgcgaaggcaaggtcgatccggtgatcggccgcgatgccgaaatccgccagacc atcgacatcctgatgcggcgccggcaaaacaatcctatcctgaccggcgaagccggcgtc ggcaaaaccgcagtggtggaaggcttggcgctgcgcatcgcgcaaaaagacgtgcccgac gtgctgcaaggggtggaagtgcataccctcgacatgggcctgctgcaagccggcgccagc gtcaagggcgagtttgaaaaccgcctgaaaagcgtgatcgacgaagtcaagaagagctcg cacgccatcatcctgttcatcgacgaagcccacaccatgatcggcgctggcggccaggcc ggccagaacgacgccgccaacctgctgaaaccggcgctggcgcgcggcgaactgcgcacc attgccgccaccacctggagcgagtacaagaaatacttcgagaaagacgcagccctggcc cgccgtttccaggtcgtcaaagtcgaagagccaagcgaagaactggcctgcgccatgctg cgcggcatggcgccgctgatggaaaagcacttcggcgtgcgcgtcttcgacgatgccatt accgaggcggtgcgcctgtcgcaccgctacatcagcggccgccagttgccggacaaagcc atcagcgtacttgataccgcctgcgccaaggtcgcactgggccagaacgcgacgccggcc ttgatcgagaacatcgtcaagaagctggatcgtctggtggcggaactgaactcgctcgaa cgtgaatcgaacgccggcggcaaacatgccgagcgcctcaaggaattgcgtgagctgcaa agcacgctgaatgcagaactggcgatccaccgcgaacgctgggaaaaagaaaaagcgctg actgatcgcatcaaggcggcccgcactgaactggaagcgatccccgcggccgaacaaacc gcggcagacgacagcaccaagccgtccaagaaagccgccaaggacagcaaggaaaaccag gaactggccaagctgatcgaagaactgaagctgctgcagggcgaaacaccaatggtgccg gtgcaggtcgacggcctggtcgtggcggaaatcgtcgccagctggaccggcatcccgctc ggaaagatggtcaaggatgaaatcaagaccgtgatcaacctcggttcgctgctgcacgag cgcgtgctcggtcagccgcatgcgatcgaagcggtggcgcagcgcgtgcgtacttcgcgc gccaacctggacgatccgaacaaacccaagggcgtgttcctgttcgtcggcccgtccggc gtcggcaagaccgaaaccgcgctggcgctggccgacgtgctgtacggcggcgaacgcaag ctggtcaccatcaacatgagcgaataccaggaagcacacagcgtctccggcctgaaaggc tcgccgccgggttatgtcggctacggcgaaggcggcgtcctgaccgaagcggtgcgccgc aatccgtacagcgtggtgctgctcgacgaggtagagaaagcccatcctgacgtgctcgaa ctgttcttccaggtcttcgacaaaggcgttctggacgacgccgaaggccgcgaaatcgac ttcaagaacaccatcatcatcctcaccagcaatgtcgcctccagcctgatcatgcaaagc tgcctcaacaaggccgcggcggaactgccgagcaccgacgacctcgaacaggcaatccgg ccgcagctggtgaaagccttcaagccggccttcctcggccgcctgaaagtgatcccctac tacccgatctccgacgacgtactggtggagatcatcaacctcaagctgggacgcatccag aaacgcatcgccatcaaccacaaggccgaattcagctacgacgagccgctggtcgaagcg gtgctggcgcgctgcaccgaagtcgattccggcgcccgcaacgtcgacaacatcctcaac ggtacgctgttgccagaaattgccgaaaccgtgctggccaagatggccgaaggcggcagc atcgccaagatcaaggtcactgccaacaagcaggggcaattcaagtacgcgattaaataa

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