Collimonas arenae: LT85_3628
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Entry
LT85_3628 CDS
T03512
Name
(GenBank) tRNA(Ile)-lysidine synthetase
KO
K09800
translocation and assembly module TamB
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_3628
Transporters [BR:
care02000
]
Other transporters
Pores ion channels [TC:
1
]
LT85_3628
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TamB
AsmA_2
AsmA_1
Motif
Other DBs
NCBI-ProteinID:
AIY42786
UniProt:
A0A0A1FE98
LinkDB
All DBs
Position
complement(4109701..4113729)
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AA seq
1342 aa
AA seq
DB search
MTEAIANSTEPAAPPPNRGGASGRLRWLWRTLAALALLLLLLFAALFYGVRSESGARALW
QLSTWALHGNLSGQLTGGTLADGLQLRNLVYRDATQQYKIDRVDAKWRLGFSPLKLQVAY
LHVGDVDARLEPTPPTPTVMPSSLKLPLQLALDDISLNKLSLHQGLTTTELSHLQLHGES
DGLQHHLVLERLDTPYGKASAKLSLNGASPFALNGGAELSGGFQHGDETEKYQLDAALSG
SLAALGIDLNARGDKLSGTAKIAVTPFAPIPFQQIELNVAHINPKLFSSGAPQADLSLQA
ALKPIAPPGASAAADVDLSTLAVSGPIHIVNTMAGALDRDRLPLIRASAELRLDTQTQRL
SQLQLKLVKDASITGQGEYHSDGKNKNSGEFSFDVAGLDLQALHGKLKPSQLRGPVNVKL
TPENQQISANLADATYKAKLEAVIDAKQIVLKTAQLAAGAARVDASGSLGLNDGMAYAVK
GTLRDFNPFLWINSSAPAKNVARAGKQPAAAKSPAKAVAANINMDIDATGNLTPELKLKL
KFAILDSSYDQLPMSGNGVLSVAGKRLLPSDLALSVAGNQVQAKGAFGAAGDRLNLKVEA
PELQRLGFGISGALHLDGQLSGTMQRPNVQATYHAEKLAFGEHRVDSLSGQADVQADLNA
KLDSSSNHLAITIDGRGLHSTDVALDKLNLNLAGTYGAHTLKLESSGELHGKPLHVTMAA
QGKLSESKAGYGWQGQVSELQNQGTPRISLVAPLSITAEAGRVFLGAARLNVADAQIDLK
NFSFDHGKIQSAGTINALNVATIFSLAHEFGGPELPVKTDLVLDSNWDFSLADSMSGFLQ
ITRRSGDLRVNPGRGDINLGLSELKLRADLQADRIKLDSQLAASRIGTLAAQVQLALQKI
DGVWSVGDSSTLSGQGTLRVPQLKSIGALIGPQVALDGSIGMDLNLSGDLGKPKLSGMVT
GDKLAVTLFDQGIQLKDGTARLKLADNVVDLQQLEFHGGDGNVRATGRLELGHDNPDLSA
SVIADHLQLFASPDRQLMLSGQAKIANVKEQLHVDGKFKIDKALFDLPKSSAPTLGDDVV
IVRKDVKARATPLTEQERLAKTAQKPAGGATPVMNVEVDFGDDFRFRGSGADLLLRGAMQ
VRSEPYQPLRATGTIHVANGTYEVFGRKLAIERGLINFQGPIDNPNINILAMKRNQEVEA
GAEITGTPSNLRVKLVSEPNVADEEKLSWLMFGHGSDSAALGQRQAAGQALALLGNYGGK
KIAQGIGFDEFSIGSSDSGIENEQVVNLGKAITEKINLGYEQSLTSAASILKLTWQFSRR
WSMVMRGGTINGLEVLYNLRFD
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagctatcgccaactcgacagaaccagcagcaccgccaccgaatcggggcggt
gcttccggccggttgcgctggctgtggcgaacgctggcggcattggcgttgttactactc
cttttattcgcagccttgttctacggcgtgcgctccgagtccggcgcacgtgcgctgtgg
cagctgagcacatgggcgctacatggcaatctctccggccagctgaccggcggcacgctg
gcggatggcttgcagctgcgtaatctggtgtatcgcgacgctacccagcaatacaagatc
gaccgcgtcgacgccaagtggcggctgggcttttcgccattgaagctgcaagtcgcttac
ctgcacgttggcgatgttgatgcccgcctggaaccgacgccgccaacgccaacggtgatg
ccatccagcctgaagcttcccttgcaactggcgctcgacgatatctccctgaataagctt
tccttgcaccaaggcctgactactaccgaactgagccatctgcaattgcatggagagtcg
gatggcctccagcatcatctggtgttggagcgcttggatacaccctacgggaaagccagc
gccaaactcagcctgaacggtgcgtctccctttgcattgaatggaggtgcggagctcagc
ggagggttccagcacggcgatgaaacggaaaaatatcagctggatgcagcattgtccggt
agcctggcagcactgggaatcgacctcaatgcgcgcggcgataaattgagcggcaccgcc
aagatagcggttacgccatttgcaccgattccattccagcagattgaattgaatgtcgca
cacatcaacccgaaactgttcagcagcggcgcgccgcaggcggacctgagtttacaggca
gcgttgaagccgatagcgccaccgggcgccagtgccgctgccgatgtcgatttgtctacc
ttggcagtgagtggtccgattcatatcgtcaatacgatggccggcgccttggatcgggac
cgcctgcccttgatccgcgccagcgcagaattgcggctcgatacgcagacccaacgactg
tctcagctgcaactgaagctggtaaaagacgccagcattactggccagggcgaataccat
agcgacggtaaaaacaagaatagcggcgaattcagtttcgatgtcgccggccttgatctg
caagcgctgcatggcaagttaaagccgtcgcaactacgcggaccggtgaacgtcaagttg
acgccggaaaaccagcaaatcagtgcgaacctggcggatgcgacttacaaggcaaagctg
gaagcggtgatcgacgccaagcagatcgttctcaaaacagcgcagctggctgccggcgcc
gcccgggttgatgccagtggcagcctcggactcaatgacggcatggcttatgcagtgaag
ggcaccctgcgcgatttcaatcccttcctgtggattaacagcagcgcaccagccaagaac
gtggcgcgcgccggcaaacagcctgctgcagcaaaatctcctgcgaaagccgtcgccgcc
aacatcaacatggatatcgacgccaccggcaacctgacgccggagctcaagctgaagctc
aagttcgctattcttgacagtagctatgatcagctgccgatgagcggcaacggcgtgctc
agtgtggcaggtaagcgtttgctgccgagtgacttggccttgtcggtggccggcaaccag
gtgcaagccaaaggcgccttcggcgccgccggcgaccgtctcaacctgaaggtagaggcg
ccggaattgcaacggctgggattcggcatctcgggcgcgttgcatctggatggacagctg
agtggcacaatgcaaaggcctaacgtacaagcgacctatcatgccgagaaactggcgttc
ggggagcatcgggtggatagcctttccggccaggccgacgtgcaagcagatctgaacgcc
aagctcgattcgagcagcaatcacctggcaatcacgatcgatggacgcggtttgcatagc
accgatgtggcgctggataaactcaacctgaacctggccggtacctacggcgcgcacacc
ctgaaactggaaagcagcggcgagttgcatggcaagcctttgcacgtgaccatggctgcg
caaggaaaactcagcgaaagcaaagccgggtacggctggcaagggcaggtcagcgaattg
caaaaccagggtacgccgcgcatcagcctggtcgcgcctttgtctattactgcggaagcg
ggtcgcgtatttctcggcgctgcccgtttgaatgtggcggacgcgcagatcgacctgaaa
aatttcagtttcgatcacggcaagatccagtctgcgggcaccatcaatgcgctcaacgtg
gcgacaatttttagcctggcgcatgagtttggcggcccggaactacccgtaaaaacggat
ctggtattggacagcaactgggatttttcgcttgccgacagcatgagcggtttcctgcaa
atcacccgacgcagtggcgacttacgtgtcaatccgggacgtggcgatatcaatctgggt
ttgtctgaactgaaattgcgcgccgatttgcaggccgaccgtatcaagctggacagccaa
ctggcggcctcaaggatcggtacgctggcggcccaggtgcaattggctttacaaaaaatc
gatggcgtgtggagcgtcggcgacagttcaacattatcaggtcagggcacgctaagggtg
ccgcagttgaaatcgattggtgcgctgattgggccgcaagtggcgctggacggaagcatt
ggcatggatttgaatctgagcggcgatcttggcaaaccgaaattgtccggcatggtcacc
ggcgacaagcttgccgttaccttgttcgatcagggaattcaattgaaggacgggactgcg
cgcttgaaattggcggataacgtggtcgatttgcagcagctggaattccatggcggcgac
ggcaacgtgcgcgccaccggccggctggaactgggacacgataatcccgacctcagcgcg
agcgtgattgcagatcatttgcaattgttcgccagcccggaccgccagctgatgctgtcc
ggtcaggccaagattgcaaatgtgaaggaacaattacacgtcgacggcaagttcaagatc
gacaaagccttgttcgacctgccgaaaagcagtgcgccgacgctgggcgatgacgtggtg
attgttcgcaaggatgtgaaggcgcgggcgacgccgctgacggagcaggagcgtctggcc
aagacggcgcagaaacctgctggcggagcgacgccggtaatgaatgtggaagttgatttc
ggcgacgatttccgcttccgcggcagcggcgccgatctgttgctgcgtggcgccatgcaa
gtccgcagcgagccttaccagcctttgcgtgctaccggcacgattcatgtcgctaacggt
acttatgaagtgtttggccgtaagctggcaatcgaacgcgggctgatcaatttccaggga
ccgatcgacaatccgaatatcaatatcctggccatgaagcgcaaccaggaagtcgaagcc
ggcgcggaaattaccggcactccttctaacctgcgcgtcaagctggtgtccgaaccgaat
gtggctgacgaggaaaaactctcctggctgatgttcggccacggcagcgatagcgccgcg
ctcgggcagcgccaggcggcagggcaggcgctggctttgctgggtaattatggcggcaag
aagattgcccagggcatcgggttcgacgaattctctatcggttccagcgactcgggcatc
gaaaacgagcaggtagtcaatctgggtaaggcgattaccgagaaaatcaatctcggctac
gaacagagcctgaccagtgccgccagcatcctgaaactgacctggcaattctcgcggcgc
tggtcgatggtcatgcgcggcggcaccatcaacgggcttgaagtgttgtacaacctgcgc
ttcgattaa
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