Collimonas arenae: LT85_3631
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Entry
LT85_3631 CDS
T03512
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor
Organism
care
Collimonas arenae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE
PAS_9
PAS
PAS_4
PAS_3
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AIY42789
UniProt:
A0A0A1FGS2
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All DBs
Position
complement(4117257..4120097)
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AA seq
946 aa
AA seq
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MFRRGSSIFIPIASLSSLILGLAITLGLFVSVRHLEYEKMDAEFRRLGSGHLKAVVDGLD
GLVHELETVNSLFVTMDTVSREQFHTFTTPMLRRAPYIKSLGFQRLVSAAQRPAFEAEMR
KYYPNFTIRQLSDGKPEPATGHEQYRVVEYLEPMAGNEAAFALDLTPSVIQEEAMQRARD
TGLPAATDLFDLKVAQNGGKRAMIILMPVYQHGAVLETVDDRRRAVIGFTSAALRADAFV
NSVLARDGVQAREDFYLRVYASPNPEASSLVYRQGNQITPSAASRWLPSWLLYDAPQDMS
QTFELAGKSWYIEASSPPRVFTKKNAGSILVLILGSLLSWMGATYLYFLSTRSKRIEQLV
DARTQQVRLATQMMKEDIVARKRAEDALQLRERAIESSANAIIISSAKLPDYLVEYVNPA
FELITGYSASEMIGRNLEVLQGVDHDQIGLEEIRSALRERRSANAVFRSYRKDGTLFWNE
LYVAPVKDSSGRVSHFVTSLYDITEMKSYEAELEHQARHDTLTGLANRNVLSDRLSQAIV
YGELYGHRVWVLFVDLDRFKFVNDTLGHNAGDLLLKEVASRLKSFTREADTIARLGSDEF
VLILPERLDEELSVGLIQGMMDAIARPLQIEGYDFFLSCSIGVAVYPNDGTDPESLLKHA
DIAMYRAKEMGNNNYQFYTAAMNERALERLRIEGDLRNALERKELLLYYQPQVDLRTGRM
VGMEALIRWKHPQLGMISPTRFINLAEETGLIVQMGAWVMHTACEQNKTWQRMGLGYLRM
SVNLSTRQFFQQNLVQQVAKVLEDTGLAPHYLEIELTESLVMTDVELAVGILNDLKSIGV
QLSIDDFGTGYSSLAYLKSFPIDALKIDQSFVRDITVDQDDAAIVASIISLAHNLRLQVI
AEGVETQEQLSYLQRHRCDEMQGFYFSEPVSAADIEILLREGKVLP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtcgtggctcgtcaattttcatacccattgcctctttatccagtttgatattg
ggcctggcgattacgctcggcttgtttgtgtcggtacgtcatctcgaatacgagaaaatg
gatgctgaattccggcgtcttggcagcggtcatctgaaagccgtggtcgacggtctcgat
ggactggtgcatgaactggaaaccgtgaatagtctgtttgtcacgatggatacagtcagt
cgcgaacaattccacacctttacgacgccgatgctgcgccgtgctccttatatcaagtca
ctcggcttccagcgcctggtgtcggccgcccagcgtccagcgtttgaagcggaaatgcgt
aagtattaccccaacttcacgattcgccagttaagcgatggcaagcctgaaccggccacc
ggtcacgaacaataccgggtagttgaatatctggaacccatggcgggcaacgaggcggcg
tttgcccttgacttaacaccaagcgtgatccaggaagaggcaatgcaacgggcgcgcgat
accggtttgccggcggctaccgatctattcgatttaaaagttgcccagaatggcggtaag
cgggccatgatcattctgatgccggtgtaccagcatggcgccgtactggaaacggtcgat
gaccggcgccgtgcggtgatcggttttaccagcgcggcactgcgcgccgatgcgttcgtc
aatagtgtattggcgcgcgatggcgtacaggcgcgtgaagatttttatttgcgggtgtat
gcgagtcccaatcctgaggcgtcttcattggtttatcgccagggcaaccagataacacca
tctgcggccagccgctggctgccgtcctggttactttacgacgcgccacaagacatgtcg
caaaccttcgagcttgccggcaagtcctggtacatcgaagcatcgtcgccgccgcgcgta
ttcaccaagaaaaatgccggttcgatcctggtgttgatactcggcagcttgctgagctgg
atgggcgccacctatctctatttcctgtcaacgcgctcgaagcgtatcgaacaattggtg
gatgcccgtacgcagcaagtgcggctggcgacgcagatgatgaaagaagatatcgtcgcc
cgcaagcgcgccgaggatgcgctgcaattgcgcgagcgcgccatagagtcgagcgccaac
gccatcatcatttccagcgccaaattgccggactatctggtggaatacgtcaatccggcc
tttgaattgattaccggctatagcgccagcgagatgatcggccgcaacctggaagtgctg
caaggtgttgatcacgatcagatcggcctggaggaaattcgttccgccttgcgcgaaaga
cgcagcgccaatgcagtatttcgcagctatcgcaaggatggcaccttgttctggaatgag
ctgtatgtggcgccagtgaaagatagttcaggtcgtgtcagtcatttcgtgacatccctg
tacgacatcactgaaatgaagagttacgaggcggagcttgagcatcaggcccggcacgac
accttgaccggcctggcgaaccgtaacgtgctaagcgatcgcctcagccaggcgattgtc
tacggagagctgtacgggcaccgggtgtgggtgctgttcgtcgacctggatcgttttaaa
ttcgtcaacgataccttgggccacaacgccggcgacttgctgctgaaagaagttgccagc
cgcctcaagagcttcacccgcgaagccgataccattgcccgtttgggcagcgacgagttt
gtcttgattctgccggaacgtcttgacgaggaactgagcgtcgggctgatccagggcatg
atggatgccatcgcgcgaccgctgcagatcgaaggctacgattttttcctgagttgcagc
attggtgtcgcggtctatccgaatgacggcaccgatccggaaagtctgctcaagcatgcc
gatatcgccatgtatcgcgccaaggaaatgggcaacaacaattaccagttctataccgcg
gcgatgaacgagcgagcgctggaacgcttgcgcatcgagggcgatctgcgcaatgcgctg
gagcgcaaggaactgttgctttattatcagccgcaggtcgatctgcgcactggccgcatg
gtcggcatggaagccctgattcgctggaagcatccgcagctcggcatgatctcaccgacc
cgtttcatcaacctggcggaagagaccggcctgatcgtacagatgggtgcctgggtcatg
cacaccgcttgcgaacaaaacaagacgtggcagcgcatgggcctgggctatctgcgcatg
tcggtgaacctgtcgacgcgccagttcttccagcagaacctggtgcagcaggtggccaag
gttttggaagataccggactggcgccgcattatctggaaatcgagttgaccgaaagcctg
gtgatgacggatgtcgagctggcagtcggtattctgaatgacttgaaatcgatcggcgtg
caactgtcgatcgacgatttcggcaccggttattcgagtctggcctatctgaaaagtttt
ccgatcgatgcgctaaagatcgatcaatcatttgtgcgtgatattaccgtcgatcaggac
gatgccgcgatcgttgcatcgatcatttcactggcccataacctacgcctgcaggtgatc
gccgaaggcgtggaaacgcaagagcaactgtcgtatttgcaacgccatcgttgcgacgaa
atgcaaggcttctatttcagcgaaccggtatctgcagcagacatcgaaattctcctgcgc
gagggaaaagtattaccatag
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