Collimonas arenae: LT85_3729
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Entry
LT85_3729 CDS
T03512
Name
(GenBank) Chitinase
Organism
care
Collimonas arenae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA_3
SpaA_4
Motif
Other DBs
NCBI-ProteinID:
AIY42887
UniProt:
A0A0A1FJ30
LinkDB
All DBs
Position
complement(4228192..4235496)
Genome browser
AA seq
2434 aa
AA seq
DB search
MWGAGGGGSAPAATFSGGGGAGGYATGNVAVTPGTGMAITVGQGGVNGAMAATYGRGGGG
GGGANNANNQASTGSSGGGMSALWGGVTEFAAGTAQMVAGGGGGSNFWNSIGAAGTSFGG
VAGGGGGASGGSSTLEGGQGGTQAAGGALGTPDAGTVASSCAGGTAGSAFQGGTGCSAPA
GSGTPAQYEGGGGGGGGFYGGGGGMAQCTNTPNPLVVGCSWNGPGGGGSGYLSASVSGGV
LTAGPNANYTGAVSPPNPAATSSLYQSGVGVGGASSSSTGSAAGNGLVVIQFNELTLQLK
KTWAAGGNSGDVASIGATTGGNNPFTPNPNNTFAFTATDATAGSSNVASIAVGNTITFPA
ETMTTGKLTNYNTVLSCTANGGATANVLSGTNGQVTNTLVIGVGDLGKAIVCTYTNTPKS
PVLTFQKALGGSGRIAAADQFALSGTGTGAPAATNTTGAAAAVTSPAYSFTGTAGTAYSL
NEAMAAGSSSTLGQYSQSVACTNVGGTTSVSGLTSLPINVTPVIGDNISCTITNTPKPVV
LTLKKALGGTGRIAGADQFALSGTGTGAPAATNTTGAGTSVTSSAYSFTATAGTAYTLNE
AMAAGSSSTLGQYSQSAACTNVGGTTNVSGLTNLPINVTPVPGDNISCTITNTPKPVVLT
LQKALGGTGRIAAADQFALSGTGTGAPAAANTTGTGTAVTSPAYSFTGTAGTAYTLNEAM
AAGSSSVLSQYSQSVACTNASGTTNVSGLTSLPINVTPVAGDNISCTITNTPKSPVLTLK
KALGGTGRIVAADQFALSGTGSGAPAAINTTGSGASITSPAYSFTATAGTAYTLNEAMAA
GSSSVLSQYSQSVACTNVGGTTNVSGLTSLPINLTPVAGDNISCTITNTPKPVVLTLQKA
LGGTGRIAAADQFALSGTGAGAPAAINTTGTVAAVTSPAYSFTGTAGTAYTLNEAMAAGS
SSVLSQYSQSVSCTNAGGTTSVAGLTSLPINVTPVAGDNISCTITNTPKPAVLTLQKTLG
GSGRVAAADQFALSGTGAGAPAATNTTGTAATVTSPAYSFTGTAGTAYTLNEAMAAGSSS
VLSQYSQSVSCTNAGGTTSVAGLTSLPINVTPRAGDNISCTIINTPKPVVLTLQKALGGS
GRIAAADQFALSGTGAGAPAATNTTGTATAVTSPAYSFTGTAGAAYTLNEAMATGSSSVL
GQYSQSVICTNAGGTTNVSGLSSLPINVTPVAGDNISCTITNTPKPVVLTLQKALGSTGR
IAAADQFALSGTGTGAPAATNTTGSGTSITSPAYSFTATAGTAYTLNEAMAAGSSSVLSQ
YSQSVACTNVGGVTNVSGLTSLPINVTPVAGDNISCTITNTMKPATVQISKISLGGASSF
DFTGTNGITAQTITTSVAGTPVNGPVQVLTAAGTATSFAETYTPSNVVPDYVISSVSCTG
MGAGGTVTRGAAQNKNQFTLDAAATAAGSNIVCTVTNAKSPTLQMRKNWVNAAVNDFFRL
TATGGGVASLDHNVAYSYNLDARAATPNETDVGGAQKVAVGDTVTLSESTAGVVNTSTYV
ASAWSCTGGGVLSGNTLTLSAADAGAAVICQITNTGKTQLTISKVSQGGVGSFSFSGTNG
ITAQTLTTATAGTPVSGPVQTLTTSGAVTVITEAIPSGYVLTAASCTGMGSGGTATADLA
NGNLTLDAAATGSGNNLACTFTNTKTATVTLAKSWSGATAGDTVSVTGTGLSTLTSTATG
VNKIDTGTATTVLVGSVINLAEAFTSGIATSYSSAVACTGTSGLSGSTLTVGASDTVIVC
TYTNTKKSADASNSGLRVVTNNQPANGVAQDVLEAFIRDSSGNPVAGAVVTFAATPSVNF
GAGVGVASTCTTVAAGTCSINATTLNPGTYSTTGVSVGGVALSGTFTVAGNNYLPSPQPY
TFAPTVPKVQIIKTTTSGSGSNTFNFGLSGLSTGTDTITVVGAGTANGASNLTGLAGQAA
SITETSPAGWPANPVSASCVDLASSNPTATFGSLNGNQLSIPAANMVAGANIRCTFTNSF
AFGVSGRVFLDNGAGAGTPNDGLINGAETGIAGVSVTLTNCVSNAAISSAVTDGSGNYSL
SVPFSTAVGASLCVNETNSGIRISTGASVGSTPLPSGTATAAAGGTYTYTRNGKPDTIAF
TWNGSGNSGLNFGQVDPSTFATSGAKTGQPGSTVTYAHTFTAGTGGSVSFQIASSIATPT
ISGWSEVIFADPTCSGSLQPGAAKLYPPSVATTVTAGQAVCIIVQEFVPASAQQGNSNDA
KVQANFTFANANPALSASYTLDDVTTVSDNALDLKKEVRNVTQSGAFGINNQAKSGEVLE
YSITYTNNGTGPISNLLINDATPQFTTFVASTTGATPATLTVCVKNTPANEPPAPTVACS
TAQAAGGTGPLNWKFTGPLAPGASGTVLFSVKVN
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtgccggcggtggcggctcggctccggctgcgactttctcgggcggcggcggc
gcgggcggttacgccactggaaatgtggccgtaacgccaggtacgggcatggcgatcacc
gttggccaaggtggtgtgaacggagcaatggcagcaacctatggcagaggaggaggcgga
ggaggcggagccaacaatgccaacaaccaggcatcaaccggttcttcaggcggcggcatg
agcgctctgtggggaggcgtcaccgaattcgctgcaggaaccgcgcaaatggtcgctggc
ggtggcggcggcagcaacttctggaattcgataggggcggctggcacttcctttggcggc
gttgccggcggcggagggggagccagcggcggtagcagtacccttgagggtggccaggga
gggacgcaggctgccggtggcgcactcggtactcccgatgcaggcactgtagcgtcgtcg
tgcgccggcggtacggcgggcagtgccttccagggcggaacaggatgttcagccccggcg
ggctcaggtactcctgcccaatacgaggggggcggcggtggcggcggcggtttctacggt
ggcggtggagggatggcgcagtgtaccaacacgccaaatccgctggttgtaggatgttcc
tggaacggtcctggcggcggcggttctggctatctttctgcatcggtgtcaggtggagtt
cttactgcgggtccgaacgcaaattacaccggagcggtgagtccgcccaatcccgctgca
accagctcattgtatcaatccggggttggtgtaggcggagcgtctagctcgtcgacagga
tcagccgcaggcaatggtctggttgtcatccagttcaatgagctcaccttgcagctgaaa
aaaacatgggcggccggcggcaattcaggcgatgtcgccagcattggagccactactggc
ggtaacaatcccttcaccccgaacccgaacaatactttcgcgttcacggcgacggacgcc
accgctggcagcagtaatgtcgcaagcattgcagtcggcaataccatcaccttcccggca
gaaaccatgaccacggggaagctgacgaactacaacacagtcttgtcctgtaccgccaac
ggcggcgccacggctaatgtcttgagcggtactaacggccaggtaacgaacaccctggtg
atcggagtcggtgatctcggcaaggccatcgtctgtacttataccaacacaccgaagtcg
ccggtgctgacattccagaaggcgctcggcggcagcggccgtattgctgcggccgaccag
tttgcgttgtccggcacgggtaccggtgcgccggctgcgaccaacacgacgggtgccgcc
gctgcggtgacttcgccggcgtacagttttaccggcaccgcaggcacggcctactcgctc
aacgaagccatggcagcaggtagcagttcgacgctgggccagtacagccaaagcgtggct
tgtaccaatgtcggcggcacgaccagcgtgtcgggtctgaccagcttgccgatcaacgtg
acgccagtcattggcgataacatcagctgtacgattaccaacacgccgaagccggtagtg
ctgacgctcaagaaagcattaggtggaaccggccgtattgcgggagctgaccagtttgcg
ctgtccggtacgggtaccggggcgccagccgcaaccaacactaccggtgcgggtacatcc
gtcacctcgtcggcatacagttttactgcgacagcaggtacggcctacacgctcaacgaa
gcgatggcggcgggcagcagttcgacgctgggccagtacagccaaagcgcggcttgtacc
aatgttggcggcacgacgaacgtgtcgggtctgaccaacctgccgatcaatgtaacgcca
gtgccaggcgacaatatcagctgcacgattaccaatacgccgaagccggtagttctgacg
ctccagaaggcgctgggtggcactggccgtattgcggccgccgaccagtttgcgttgtcc
ggcacgggtaccggtgcgccggctgcggccaacacgacgggtaccggcaccgcggtgacc
tcgccggcatacagtttcaccggtacggcaggcacggcttacacgctcaatgaagcgatg
gcggcaggtagcagctcagtactgagccaatacagccaaagcgtggcttgtaccaatgct
agtggcacgaccaatgtgtcgggcctgaccagtctgccgatcaatgtaacgccagtggcg
ggcgacaatatcagctgcacgattaccaacacgccgaaatcgccggtgttgacgctcaag
aaagcgttgggtggcactggccgtattgtggcggccgaccagtttgcgttatccggtaca
ggtagtggcgcgccggctgcgatcaacaccaccggttcgggcgcatccatcacttcgccg
gcgtacagttttaccgctacggcaggcacggcctacacgcttaatgaagcgatggcggca
ggcagtagttcggtattgagtcagtacagccaaagcgtggcttgtaccaatgttggcggc
acgacgaacgtgtcaggcctgaccagcctgccgattaatctgacaccggtcgcaggcgac
aatatcagctgcacgattaccaatacgccgaagccagttgtgctgacgctccaaaaggca
ttgggtggcactggccgtattgcggcggccgaccagtttgcgctgtctggcacaggtgcc
ggcgcgcctgccgcgatcaatacgacgggcacagtcgctgcagtgacctcaccggcatac
agtttcaccggcacggcaggcacagcttacacgctcaacgaagcaatggcggccggcagc
agttctgtattgagtcagtacagccaaagcgtgagctgtaccaatgctggcggcacgacc
agcgtggcaggtttgaccagcctgccgattaatgtgacgccagtcgcaggcgacaatatc
agctgtacgattaccaacacaccgaagccggcggtgctgacgctccaaaagacgctgggc
ggcagcggccgtgttgctgcggccgaccagttcgcattgtccggcacgggcgccggcgca
ccggctgcaaccaatacgacgggtactgctgctacagtgacctcgccggcgtacagtttc
accggtacggcaggcacggcttacacgctcaatgaagcaatggcggcaggtagcagttcg
gtactgagtcagtacagccaaagcgtgagctgtaccaatgctggcggcacgaccagcgtg
gcaggtttgaccagcctgccgatcaatgtaacgccaagggcaggcgacaacatcagctgt
acgattatcaatacgccgaaaccggtggtgctgacgctccaaaaggcattgggtggcagc
ggccgtattgcggccgccgatcagtttgcgctgtccggcacgggagccggcgcgccggct
gcaaccaatacgacgggtaccgccaccgcggtgacctcgccggcatacagtttcaccggt
acggcaggcgcggcatacacgctcaacgaagcaatggcgacgggtagcagttcggtactg
ggtcaatacagtcaaagtgtgatttgtaccaatgctggcggcacgaccaatgtgtcaggc
ctgagcagtctgccaatcaatgtgacgccagtcgcaggcgacaatattagctgtacgatt
accaatacaccgaaaccggtggtgctgacgctccaaaaggcattgggcagcactgggcgt
attgcggcagccgaccagtttgcgttgtccggtacaggtaccggcgcaccggcggcaacc
aacaccaccggttcgggcacatccatcacttcgccggcatacagttttaccgccacggca
ggcacggcctacacgctcaacgaagcgatggcggcaggcagcagttcagtgttgagccag
tacagccaaagcgtggcttgtaccaatgtcggcggcgtgaccaacgtgtcaggcctgacc
agcctgccgatcaatgtgacgccagtggcgggcgataacatcagctgcacgattaccaac
accatgaagccggcgaccgtgcagatcagcaagatcagcctgggtggggcgagcagcttc
gacttcaccggcaccaacggtattacagcgcagaccatcaccaccagcgtggcgggaacc
ccggtcaacgggccggtccaggttttgaccgcggcgggcacggcgaccagcttcgccgaa
acttacacgccaagtaacgtggtgcccgactatgttatctccagcgtcagttgcaccggc
atgggcgctggcggcacggtcacacgaggagccgcgcagaacaagaaccagttcacgctg
gacgcagcggcgacggcggcgggttccaacatcgtttgtacggtcaccaacgccaagtcg
ccgaccctgcaaatgcgcaagaactgggtcaatgcggccgtcaacgatttcttccgcctg
acggcgacaggtggcggtgtggcgagcttggatcacaatgtcgcttacagctacaatctc
gacgcgagagccgctactccgaacgagacagatgtcggtggagcgcaaaaggtggcggtg
ggcgatactgtcaccctgtcggagtcgaccgcaggtgtggtcaataccagcacttatgtg
gctagcgcctggagttgcaccggcggcggtgtcttgagcggcaatacgctgactttgagc
gcggcggatgcaggcgcagccgtcatctgtcagatcaccaatactggaaagacgcagctg
accatcagcaaggtgagccaaggtggcgtgggcagcttcagtttcagcgggactaacggc
atcaccgcgcagactctgaccaccgccacggccggtacgccggttagcggcccggtccag
acgctgaccacgtcgggcgcggtgaccgttatcaccgaagcgattccgagcggctacgtg
ttgactgcagccagctgtaccggcatgggctccggcggcaccgcgaccgccgacctggcc
aacggaaatctgacactggacgcggccgcgacgggatctggcaataatctcgcctgtact
ttcaccaataccaagacggcgacggtcacgctggcaaagagctggtcgggcgcgactgcg
ggcgacacggtaagcgtcaccggtaccggcctgagcacactgacgtcgaccgcgactggc
gtcaacaagatcgacaccggtacggccacaaccgtcctggtaggcagcgttatcaacctg
gccgaggctttcaccagcggcattgccaccagctacagcagcgcagtggcttgtaccggc
accagcggcctgtcgggcagtaccctgacggtgggcgcaagcgataccgtcatcgtctgc
acctacaccaataccaagaagtcggcggacgctagcaactccggcctgcgcgtcgtgacg
aacaaccagcctgcaaacggtgtggcgcaggatgtgctggaagcattcattcgtgactcc
agcggcaatccggttgcaggcgccgtggtcactttcgcggccacccccagcgtgaatttc
ggcgcaggcgtcggcgtggccagcacctgtacgacggtggcggcgggtacctgctcgatc
aatgctaccacccttaatcctggaacctacagcacgacaggggtgagcgttggcggtgta
gccctgtccggcacgttcaccgtggcaggcaacaattacctgcctagcccgcagccttac
accttcgcccctacggtgcccaaggtccagatcatcaaaacgaccaccagcggtagcggc
agcaataccttcaacttcggtctaagcggtctcagtaccggtactgacaccatcaccgtg
gtgggcgctggcactgcgaacggcgcttcgaatctgacaggacttgccgggcaagcggct
agcatcaccgaaacttcaccagccggctggcccgcaaatcctgtcagcgccagttgcgtt
gatctggccagcagcaacccgacagctactttcggcagcttgaacggcaatcagttgagc
attccggcggctaacatggtggctggcgctaacatccgctgtacctttaccaatagcttc
gcgttcggtgtcagcggccgcgttttcctggacaacggcgccggtgcgggcacgcccaac
gacgggctgatcaatggcgctgaaaccggtatcgccggagtaagcgtgacgctgaccaat
tgcgtcagcaatgcagcgatcagtagcgcagtcaccgacggcagcggcaactactctttg
agcgtaccgttctcgaccgctgtgggcgcaagcttgtgtgtcaacgagaccaatagcggc
atccgtatctcgaccggcgcgtcggttggcagcacgccgctgccttccgggacggcgacg
gccgcggccggggggacttacacctacacgcgcaatggcaagcctgacactattgctttc
acatggaacggcagcggcaacagcgggctgaatttcggccaggtggatcccagcactttt
gccaccagcggcgccaagaccggccagcctgggagcacagtgacttacgcacacactttc
accgccggtactggtggcagtgtgagctttcagattgccagttcaattgcgacgccaacc
attagcggttggagcgaagtgatctttgccgacccaacctgctccggcagcctgcagccc
ggtgccgccaaactgtatccgccttctgtagccacgacggtgacagcagggcaggccgtg
tgcatcatcgtgcaggagtttgttccggcctcggcgcaacagggcaacagcaacgacgcc
aaggtgcaggctaactttaccttcgccaatgcgaacccggcgctgagtgccagctacacc
ctggatgatgtgaccacggtgtcggataacgcgctcgatttgaagaaagaggtcaggaac
gtgacgcagagcggtgcgtttggcatcaacaaccaggctaagtcgggtgaggtgctggag
tacagcatcacatacacgaacaacggcacgggtcctatcagtaatctgctgataaacgac
gcaacgccacagttcacgacttttgtggcgagtactacaggtgcgacccccgcgacactc
acggtatgcgtgaagaacacgccggccaatgaaccgcctgcaccgacagtggcatgcagc
acggctcaggctgcgggcggaaccggcccattgaattggaaatttacgggaccactcgca
ccgggcgccagcggaacagtcctgttttcggtcaaggttaactga
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