Collimonas arenae: LT85_3817
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Entry
LT85_3817 CDS
T03512
Name
(GenBank) Type IV fimbrial biogenesis protein PilY1
Organism
care
Collimonas arenae
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GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
AIY42975
UniProt:
A0A0A1FGZ2
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Position
complement(4323193..4325250)
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AA seq
685 aa
AA seq
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MNKIFRIIWNTATGSWCVVGELAHARGKTKSTSKGRVVMGIIVAGTVFLGANEPVLAAAT
GGSGVFTTGVTQQDIASNVATGTGSNASGGGATAIGLNSNAPGIQATAIGMGSNASGQSA
TAIGGSTASGAYSFAIGVNATASVNGGIAIGENSASSDAGTIAIGLKAIASGNSAIASGA
DSTASNLYTIATGFFSTASGNSAIAYGAFSSASGYGSIATGTNSTASGPGAIATGLGSSA
SGSYANATGYYSSASGSQAIASGTNSAAYGDNSIAQGAFAQASLNSVAIGSNAVASINNS
VALGANATTSAAVAVSSVTVGATTFGTFAGSTPVGVVSVGSAGAERQVTNVAAGQITATS
TDAVNGSQLYSVASELNAAITNIANIPKNNPSGPTTTGNTAPVASSEGSTFAGSVGAAGS
NSLAVGTNAVATGQNSTATGQGAMANAAATTATGAGASATAANATAVGAGTQATASNSVA
LGANSMATGQNSTATGQGAVANAAGATATGAGALATAANATAVGAGAQVSGSNSVALGAN
SVANQANSVSVGSAGNERAITNVAAGVNTTDAVNVGQLNSGVAGAVTQANQYTNQQVNQL
QNQIDQNNRTAAGGIAAAMAAGGLPQPTSPGKSMVAVAGSRWQGQTGLALGLSTVSENNR
WVYKAAITSSSVGQTGGVVSAGYQW
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatatttagaattatctggaatacggccactggtagttggtgtgttgtcggc
gaattagcacatgctcgtggaaaaacaaaaagcacgtccaaagggcgtgtcgtcatgggt
attattgtcgcgggtacggtttttttaggtgcgaatgaacctgtgcttgccgccgcaact
ggcggctccggtgtgttcactacaggtgtaacccaacaagatattgctagcaatgtagca
acgggcactggttccaatgcgtccggaggaggagctaccgcgattgggctcaactccaat
gcacctggaatccaggccactgccattgggatgggctccaatgcgtcaggacaaagtgca
accgctattggaggatctacagcctctggcgcttactcatttgccatcggcgtaaacgcc
actgcgtccgtaaatggtgggattgctatcggcgaaaattccgcctcctctgacgctgga
acaatcgctattggactgaaggccattgcctctggtaattcagcaattgcttccggtgcg
gattccaccgcctctaacctttatacaattgccaccggttttttttccaccgcttctggt
aattcagcaattgcatatggggcattttcctctgcttctggttatggatcgattgctacc
ggtacaaattccaccgcctctggccctggagcaatcgcaactggacttggttcctctgcc
tctggtagttatgcaaacgcaactggatattattcctctgcctctggtagtcaagcgatc
gctagcggtacaaattcagctgcctatggcgataattcgattgcgcagggcgcgttcgcg
caggccagtctcaatagtgtggcaatcggctctaatgcagtcgccagcatcaataactcg
gtagcgcttggcgccaacgctacgacatcggcagcagtcgccgtgagttcagttaccgtt
ggagcgaccactttcggcacgttcgctggtagtacaccagtcggcgtggtcagcgtcggc
tccgccggcgcggagcgccaggtaacgaacgtggctgcaggccagatcacggcaaccagc
actgacgcagtgaatggcagccagttatattcggtggccagcgaactgaatgcggcgatc
actaacatcgctaacatccctaaaaataatccgagtggcccgactacgacaggcaacact
gctccagtggcttcgagcgaaggtagtacgtttgcgggtagtgtaggtgcggcaggcagc
aattcgcttgcagtgggcaccaatgctgtggctaccggccagaattcgactgccactggt
cagggcgctatggcgaacgctgcagccacaacggcgaccggcgcaggtgcctcagccaca
gccgccaacgctactgcggttggagccggaactcaggcaacggcgagcaattcggtggcg
ttaggcgccaattcgatggccacaggtcagaactcgactgccactggtcagggggccgtg
gcaaatgctgctggtgctacggcgactggtgcaggcgctttggctacagctgctaatgca
acggcggtgggggcaggtgcacaggtatcgggaagcaattcggtggcgctgggtgccaac
tcggtggcgaatcaggcaaattccgtatcagtcggctccgccggcaatgaacgcgctatc
acgaatgtcgccgcgggcgtcaatacaactgacgctgtcaatgtcggacagttgaactca
ggtgtcgcaggcgctgtgacacaagctaatcagtacacaaatcagcaagttaatcaactg
cagaaccagatcgatcagaacaaccgaactgctgcaggcggcattgcggcggcaatggct
gcgggaggtttgccgcaacctacgagtccaggaaaaagcatggtggctgtcgccggcagt
cgctggcaaggacagaccggacttgccctagggttgtctactgtttctgaaaataacaga
tgggtatacaaggcggcgatcaccagcagcagtgtcgggcagaccggcggcgttgtctct
gcgggctatcaatggtag
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