Collimonas arenae: LT85_3959
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Entry
LT85_3959 CDS
T03512
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
care03009
]
LT85_3959
Enzymes [BR:
care01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LT85_3959
Ribosome biogenesis [BR:
care03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LT85_3959
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIY43117
UniProt:
A0A0A1FJP1
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Position
complement(4467252..4469255)
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AA seq
667 aa
AA seq
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MNPPSSNEAPVVDVTAATESKPAKKPRARKAATVAADAATAPAAETSSADIAEPVKRAPR
APRKKAVVAVDEGSAASEVAHVAAVAPEAVAAVKPKAAPRKKAPAVVAEPVASVEAVAQV
APVADAAPFVNVINVETTPRERPAKRGVRGPRALRSNRAAQRAQESSVAADAVVETGNLA
AVEGQPVASQNADSPVGEVRQPRGDRNNNNGRNGDRGTDRNSRDRQQKGKKPQAQNGKPG
QQGQRNGKPGSRTGDADEVFSFVTSESFDTLVTTEDANDRRHAAQKNVRRDLTAEDDAPK
LHKVLAEVGLGSRRDMEELIIAGRVSVNSEPAHIGQRILPTDQIRINGKLLQRKVSKRPP
RVLVYHKPAGEIVSHNDPDGRPSVFDRLPNMKAAKWLAVGRLDFNTEGLLLFTTSGDLAN
RLMHPRYGIDREYAVRTLGELEQGMRQKLLAGVELEDGVAQFTKIADGGGEGINKWYRVV
IGEGRNREVRRMFEAIGLTVSRLIRTRYGAMTLPRGLKRGRWEELDENAVRDMMAAHGLD
KPAGQSAGGSKGRPDFNRDRQPNGNRADSAPQGPAGYRDQGGFGQSRGNQGRGQGGGQGR
PQGGGQPRSRQPDPLQTALGFPDAGQQRRNGGGSGFARPSRPNKAAGGPTGGGHYGAQGG
PRRRPRG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacctagttccaatgaagcaccggtcgtcgacgtgacagccgccaccgaatcg
aagccggcgaaaaagccgagagcgcgcaaggccgcgacggtcgccgctgacgctgctacg
gccccggctgcggagacttcgtctgctgatattgccgagccggtcaaacgtgctccgcgc
gcaccgcgcaagaaagcagtcgtggcggtcgacgagggcagtgctgcatcggaagttgcg
catgttgctgcggttgcaccggaagctgtagctgcggtcaagccgaaagccgcgccacgc
aagaaggcgcctgctgttgtggccgagccggtcgccagcgttgaggcagttgcgcaggta
gcgccagtcgctgatgcggcgccattcgtgaatgtgatcaatgtagaaacaacgccgcgt
gagcggccagccaaacgtggcgttcgtggtccgcgcgctttgcgtagcaaccgcgccgcc
cagcgcgcccaggagtcgtctgtcgccgcggatgctgtggtcgagactggcaatctggct
gcagttgaaggtcagccggtagcgtcgcaaaatgctgacagtcccgtcggtgaagtgcgt
cagccacgtggcgatcgtaacaataacaatggccgtaacggcgaccgcggcaccgaccgc
aattcgcgcgaccgccagcaaaagggcaagaagccgcaagcgcagaatggcaaaccgggc
cagcaaggtcaacgtaatggcaaaccaggatcgcgtaccggcgacgccgatgaagtgttt
tcgtttgttacctccgagtcgttcgatacgctggtcacgactgaagacgcaaacgatcgt
cgccatgctgcacaaaagaacgtccggcgcgacctgaccgccgaggatgacgcacccaag
ctgcataaggtgttggcagaggtcggcctgggttcgcggcgcgatatggaagaattgatt
atcgctggccgtgtttcggtcaacagcgagccggcccatatcggccagcgcatcttgccg
accgatcagattcggatcaacggtaagttgctgcagcgtaaagtcagcaagcgtcctccg
cgcgtactggtgtatcacaagccagccggtgaaatcgtcagccacaacgaccctgatggc
cgtccatcggtgtttgaccgtttacctaatatgaaggcggccaagtggctggctgtcgga
cgtctggacttcaataccgaaggtttgctgttgtttacaacctcgggcgacctggctaac
cgtctgatgcacccgcgctatggcatcgaccgcgaatacgcggtacgaaccctgggtgag
ctggagcagggcatgcgccagaaactgttggccggcgttgagctggaagacggcgttgcg
cagtttactaagattgccgatggcggcggtgaaggtatcaacaagtggtatcgcgtggtg
atcggggaaggtcgtaaccgtgaagtgcgccgcatgttcgaagcgatcggtctgactgta
tcgcgtctgatccgcacccgttacggcgccatgaccttgccacggggcctcaaacgcggt
cgttgggaagagctggatgagaatgcagtgcgcgacatgatggcagcgcatggtctggat
aagcctgccggccagagtgcaggcggcagcaaggggcgtcccgatttcaacagggatcgt
caacctaacggcaatcgcgcagatagtgcgccgcaaggccctgcaggttatcgcgatcaa
ggcggatttggccaatcgcgcggcaaccaagggcgtggccaaggtggcggccaaggtcgt
ccgcaaggcggtggccagccgcgtagccggcagccggatccgctgcaaactgcattgggc
tttccggatgccgggcagcaacggcgcaatggtggcggcagcggttttgcccgtccgtca
cgccctaacaaggcggctggcggaccaaccggcggcggacactacggcgcccaaggcgga
ccacgtcgccgtccgcgcggctaa
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