Collimonas arenae: LT85_4038
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Entry
LT85_4038 CDS
T03512
Name
(GenBank) putative permease
KO
K07091
lipopolysaccharide export system permease protein
Organism
care
Collimonas arenae
Pathway
care02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT85_4038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_4038
Transporters [BR:
care02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
LT85_4038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AIY43196
UniProt:
A0A0A1FFA5
LinkDB
All DBs
Position
complement(4548570..4549709)
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AA seq
379 aa
AA seq
DB search
MIFQRALRRELISTAGAVFTTLFTIIVTVMLIKILGQAAGGQIASQDVVALIGFQSLNYM
PILLILTGYISVLLVVTRSYQDSEMVVWFASGQSLVRWIRPVLEFGLPIIILTALLSFVA
TPWANNQSAQYRERFEKREDISRVSPGKFQESAAANRIFFVEGISGDSTKVKNVFVNTQQ
DGKNSIVVAKEGNVEIDKNGDKFLVLSKGRRYDVLAAQNEFRQMEFERYGVLVASSSQAE
NGDRSAQALPTVDLLKNRNGFNMGELLWRLSLPLMALCLMLLAIPLSFVNPRVGRSASLL
IALLLYVSYSNITSIFQAAVVQARLSFGIAWWPMHLVVLIIVGLLFLWRLNVNSRFHPLV
MWSAVKHARLIKTKKPAAT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatctttcagcgcgcactacgtcgcgaattaattagcaccgccggtgccgtatttact
acgctcttcacaattatcgtcacggtaatgctgatcaagattctgggacaggccgccgga
ggacagatcgcgtcgcaggacgtggtcgccctgatcggcttccagtccctcaactacatg
ccgattctgctgatcctgacgggttacatatcggtgctgctggtggtcacgcgcagttat
caggactccgaaatggtagtctggtttgcctcaggccagagcctggtgcgctggatccgg
ccggtgcttgagttcggcttgccgatcattatcctgaccgccctactcagtttcgtggcg
acgccctgggccaacaaccagagtgcgcagtaccgcgaacgctttgaaaagcgcgaagat
atttcccgggtttcacccggcaagttccaggaatcggcggcggctaaccggatttttttc
gttgaaggtatttccggcgacagcaccaaggtcaagaatgtttttgtgaatacccagcag
gatggcaagaacagcatcgtggtggcgaaggaaggcaatgttgaaatcgacaagaacggc
gataaatttctagtgttgtcgaaggggcggcgctatgacgtcctggctgcacagaacgaa
ttccgccagatggaatttgagcgttatggcgtgctggtagccagcagttcgcaagccgaa
aatggcgaccggtccgcgcaggccttgccgacagtggatttgctgaagaatcgcaacggc
ttcaatatgggcgagctgctatggcgcctgtcgttgccgctgatggcgttgtgcctgatg
ctgctggcgataccgctcagtttcgtcaatccgcgggtagggcgttcggccagcttgctg
attgctcttttactgtatgtttcctatagcaatatcaccagtattttccaggctgcggtg
gttcaggcgcgtctgtcttttggtatcgcctggtggcccatgcatttggtcgtattgatc
attgtcggcttgctgttcctatggcggctcaatgtgaatagtcgcttccatcccttggtg
atgtggtctgccgtgaagcatgcgcgtctgataaaaactaaaaaaccggcggcgacatga
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