Collimonas arenae: LT85_4124
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Entry
LT85_4124 CDS
T03512
Name
(GenBank) tRNA-i(6)A37 methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
care03016
]
LT85_4124
Enzymes [BR:
care01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LT85_4124
Transfer RNA biogenesis [BR:
care03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LT85_4124
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AIY43282
UniProt:
A0A0A1FK87
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Position
4634901..4636253
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AA seq
450 aa
AA seq
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MEKTMQKKVFIKTFGCQMNEYDSDKMADVLNASDGLVKTDRPEDADVILLNTCSVREKAQ
EKVFSDLGRLRELKRLNPDLLIGVGGCVASQEGAAIVKRAPYVDMVFGPQTLHRLPEMIS
QRRTTGNAQVDISFPEIEKFDHMPPAKVDGATAFVSIMEGCSKYCSYCVVPYTRGEEVSR
RFEDVLTEVAGLAEQGVKEITLLGQNVNAFRGEMADGEIADFALLIEYIAEIPGIERIRF
VTSHPKEFTQRLIDTYAKVPKLVDHLYLPAQHGSDRILSAMKRGYTVLEYKSVIRRLRQV
RPNITISSDFIIGFPGETDADFEALMKLITDIGYDNSFSFIFSPRPGTPAANLQDDTPHE
VKLKRLQHLQSVVEQNMSKISAAMVGTVQRILVEGPSKKNPDELQGRTENNRVVNFNAGP
NGARLIGQLADVTITESLVYTLRGEIVVAE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacgatgcaaaagaaagtattcatcaagaccttcggctgtcagatgaacgag
tacgactcggacaagatggccgatgtgctgaacgcttccgacggactggtcaagacagat
cgcccggaggatgccgacgtgatcttgctcaatacctgttcggtgcgcgaaaaagcgcaa
gagaaagtgttttccgacctcggccgcctgcgcgagctgaagcgtctcaatcccgatctg
ctgatcggcgtcggtggctgcgtggcgtcgcaagagggtgcggcgatcgtcaagcgcgca
ccgtacgtcgatatggtgttcggcccgcagaccctgcaccggctgccggagatgatcagc
cagcgccgcactaccggcaacgcacaggttgacatcagcttccctgaaatcgaaaaattc
gatcacatgccgccggccaaggtcgacggcgcgaccgcgttcgtgtcgatcatggagggt
tgcagcaaatattgcagttattgcgtggtgccttacacccgcggcgaagaagtctcgcgc
cgttttgaggatgtgctgactgaagtggccgggttggccgagcaaggcgtcaaagaaatc
acgctgctgggccagaacgtcaatgccttccgcggcgagatggcggacggcgagattgcc
gactttgccttgttgatcgaatacatcgccgagattccaggcatcgaacggatccgcttt
gtcaccagccatccgaaggaattcacacagcgtctgatcgatacctacgctaaggtgccg
aagctggtagatcatttgtacctgccggcgcaacacggttccgaccgtatcctgtcggcc
atgaagcgcggctataccgtgctggaatacaaatcggtgatccggcgcttgcgccaggtg
cgcccgaacatcacgatttcgagcgatttcatcattggcttcccaggcgagaccgatgcc
gatttcgaggcattgatgaagctgattaccgatatcggctacgacaacagtttcagcttc
attttcagcccgcgtcctggcacgcctgcggccaatctgcaagacgatacgccacatgag
gtcaagctgaaacgcttgcagcacttgcaatcggttgttgaacagaacatgagcaagatc
agtgcagcaatggtcggcactgtacagcgcatcctggtcgaaggcccttccaagaaaaat
ccggatgagctgcaaggccgcaccgagaataaccgggtggtcaatttcaatgcagggcca
aacggcgcgcgcctgatcggccagctagccgacgtcacgattacagaaagcctggtctat
accttgcgcggcgaaatcgtcgtggcagaatag
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