Collimonas arenae: LT85_4242
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Entry
LT85_4242 CDS
T03512
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
care
Collimonas arenae
Pathway
care00550
Peptidoglycan biosynthesis
care01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT85_4242
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
care01002
]
LT85_4242
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
care01011
]
LT85_4242
Enzymes [BR:
care01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LT85_4242
Peptidases and inhibitors [BR:
care01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LT85_4242
Peptidoglycan biosynthesis and degradation proteins [BR:
care01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LT85_4242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AIY43400
UniProt:
A0A0A1FI65
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All DBs
Position
complement(4754505..4755932)
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AA seq
475 aa
AA seq
DB search
MKKIFAISLLVSSSFLLVSVQAQESSSSVPAPFSKALQIAGIPAQGVGVYVQEVDGTGKV
LASSNAAVPFNPASTMKLVTTDAALELLGPAYRWKTQAYADGSQVGNVLQGDLIFKGNGD
PKLVQENFWLFLRQIRAKGIRDIRGNIVLDRSSFDETAYDPSEFDGDPMKPYNVGPDALL
LNYKALTFQFVPDPDKRQVSVVLDPPMSGYPVKPPRLGQGSCDDWQGKLQASVDADGASF
NGVLPASCGEKTWYVNPYKMNSTQYFGAVFRQMWTDLGGTFSGSVKNGSTPPGARLITEW
SSVTLPEVIRDINKYSNNVMARQVLLTIAADILKLPATPERGARAIQTWLANKGIDASGL
VIENGSGLSRNEKISAQTMGRMMAAAFQSPVMPEFVSSMPLVGYDGTMRKRLKDQSVAGQ
AHVKTGTLNDVRAIAGYVLAASGKYYAVVCLINHPNAGRGQAAQDVLLQWVYENG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaatcttcgcgataagtctgttggtttcatcttccttcctgttggtcagcgtt
caggcgcaagaatcctcctcttccgttcccgcaccatttagcaaagccctgcagattgca
ggcatcccggcccagggcgtcggcgtgtatgtgcaggaagtcgatggcaccggcaaagtg
ctggcgtcgtcgaacgccgccgtgccgttcaatccggcgtcgaccatgaagctggtcacc
accgacgccgcgctggagttgctgggcccggcctatcgctggaaaacccaggcctatgcc
gacggcagccaggtcggcaatgtcttgcagggcgatttgattttcaagggtaatggcgac
cccaagctggtgcaggaaaatttctggctgttcctgcgtcagattcgcgccaaaggtatc
cgcgatatccgcggcaatatcgtgctggatcgcagcagcttcgatgaaaccgcctacgac
ccttccgaattcgacggcgacccgatgaaaccgtataacgtcggccccgacgccttgctg
ctgaactacaaggcgctgactttccagtttgtcccggatcccgacaagaggcaggtcagt
gtcgtcctcgatccgccgatgagcggttatccggtcaagccgccgcgcctggggcagggt
agttgcgacgactggcaaggcaagctgcaagcctcggtcgatgccgatggcgccagtttc
aacggcgtgctgcctgcctcctgcggcgaaaagacctggtacgtgaatccctacaagatg
aactccacccagtactttggcgccgtgttccggcagatgtggaccgatctcggcggcacg
ttcagcggcagcgtcaaaaatggcagcacgccgcccggcgcacgtctgatcactgaatgg
agttcggtcaccttgccggaagtgatccgcgatatcaacaaatacagcaacaacgtcatg
gcgcgccaggtgctgctgacgattgccgcagacatcctgaaactgccggcgacaccggag
cgcggcgcccgcgccatccagacctggctagcaaacaagggcatagacgccagcggcctg
gtgatcgaaaacggctcgggattgtcgcgcaacgaaaagatttcagcgcagaccatgggc
cgcatgatggccgccgcttttcagtcgccggtcatgccggagttcgtctcttcgatgccg
ctcgtcggctacgacggcaccatgcgcaaacgcctgaaagaccaaagcgtggccggccag
gcccacgtcaagaccggtaccctgaacgacgtccgcgcgatcgccggttatgtgctggct
gcttcgggaaaatactatgcggtagtctgcctgatcaatcatcccaatgccggcagggga
caagcggcacaagacgtcctgttgcaatgggtgtacgaaaacggctga
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