Collimonas arenae: LT85_4294
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Entry
LT85_4294 CDS
T03512
Name
(GenBank) SSU ribosomal protein S1p
KO
K02945
small subunit ribosomal protein S1
Organism
care
Collimonas arenae
Pathway
care03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LT85_4294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
care03011
]
LT85_4294
Ribosome [BR:
care03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LT85_4294
Bacteria
LT85_4294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AIY43452
UniProt:
A0A0A1FKL2
LinkDB
All DBs
Position
complement(4821760..4823478)
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AA seq
572 aa
AA seq
DB search
MSITVLSPASAGADEFAALFEESLSRQDMRSGEVISAEVVRLDHNFVIVNAGLKSEAFIP
IEEFKNDNGELEVAVGDFISVAIESLENGFGDTILSRDKAKRLASWLSLEKAMESGEIVT
GTVNGKVKGGLTVLTNGIRAFLPGSLVDTRPVKDTTPFEGKTMEFKVIKLDRKRNNVVLS
RRAVIEASMGEERQKLMETLKEGTIVTGVVKNITDYGAFVDLGGIDGLLHITDLAWRRVR
HPSEVLTVGQEITAKVLKYDQEKNRVSLGVKQLGDDPWTGLSRRYPQSTRLFGKVTNLTD
YGAFVEVEQGIEGLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLEIDEDRRRISLGMKQC
KANPWDDFAVTHKKGDKVKGAIKSITDFGVFIGLAGNIDGLVHLSDLSWTETGEEAVRRF
KKGDELEAIVLAIDVERERVSLGVKQLEGDPFNNFAAMNDKGALVSGTVKSVEPKGAVIQ
LSDEVEGYLRASEISRDRVEDAGTHLKVGDTVETMVINIDRKARGIQLSIKAKDNVETQE
AMQKLSSASDSNAASGTTSLGALLKAKLDNKN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcactgttctgtcccctgcatctgccggcgccgatgaatttgccgcgctgttt
gaagaatcgctgtcacgtcaagacatgcgttctggtgaagtgatttctgctgaagtcgtg
cgccttgaccataacttcgttatcgtcaacgcaggcctcaagtccgaagccttcattcca
atcgaagaattcaaaaatgacaacggcgaactcgaagtagctgtcggcgatttcatctcc
gtcgctatcgaatcgctggaaaacggtttcggcgacacaatcctgtcgcgcgacaaggcc
aagcgtctggcatcgtggctctcgctggaaaaagcgatggagtccggcgagatcgttacc
ggtactgtcaatggcaaggtcaagggcggcctgaccgttctgaccaacggcatccgtgcc
ttcctgccgggttcgctggtcgacacccgtccggtcaaggacactacgccgttcgaaggc
aagaccatggaattcaaggtcatcaagctcgatcgcaagcgtaacaacgtcgtgttgtcg
cgtcgcgcagttatcgaagcttcgatgggcgaagagcgccagaagctgatggaaaccctg
aaagaaggcaccatcgttaccggcgtcgtcaagaacatcaccgactatggcgcattcgtg
gacctgggcggcatcgacggcctgttgcacatcaccgacctggcatggcgtcgtgtgcgt
catccttcggaagtgctcacagtcggtcaagagatcactgccaaggtcctcaagtacgat
caagaaaagaatcgcgtttccctgggcgtcaagcaactgggcgatgatccttggaccggt
ctgtcacgtcgttacccacaaagcacccgtctgttcggtaaagtcaccaacctcaccgac
tacggcgcattcgttgaagtcgaacaaggtatcgaaggcctggtccacgtttccgaaatg
gattggaccaacaagaacgtggcgccaaacaaagtcgttcaattgggcgatgaagttgaa
gtcatggttctggaaatcgacgaagaccgccgccgtatcagcctgggcatgaagcaatgc
aaagctaatccttgggacgacttcgctgttacccacaagaagggcgacaaggtcaagggc
gcgatcaaatcgataaccgacttcggcgtgttcatcggcctggccggtaacatcgacggt
ctggtgcatctgtcggatctgtcctggactgaaaccggcgaagaagccgttcgtcgcttc
aagaagggtgacgagctggaagccatcgttctggcaatcgatgttgagcgtgagcgcgtt
tccctgggcgtcaagcaactggaaggcgatccattcaacaacttcgctgcaatgaacgac
aagggtgcactggtttccggtacagtcaagtcggtcgagcctaagggcgccgtgatccag
ttgtcggatgaagttgaaggctacctgcgcgcttccgaaatctcccgcgatcgcgtggaa
gatgccggtacgcacctgaaggtcggcgacacagtcgaaaccatggtcatcaacattgac
cgcaaggctcgcggcatccagctgtcgatcaaggcgaaagacaatgttgaaacccaggaa
gcaatgcaaaagctgtcttcggcttctgactccaatgccgcttccggtacgactagcctg
ggcgcgctgttgaaggccaagctcgacaacaagaactaa
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