Collimonas arenae: LT85_4302
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Entry
LT85_4302 CDS
T03512
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
care03032
]
LT85_4302
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_4302
Enzymes [BR:
care01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LT85_4302
DNA replication proteins [BR:
care03032
]
Prokaryotic type
DNA Topoisomerases
LT85_4302
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LT85_4302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIY43460
UniProt:
A0A0A1FIC5
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All DBs
Position
complement(4833782..4836466)
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AA seq
894 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN
RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDGAAAM
RYTECRLDKIAGELLADLDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
NIPPHNLTEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGREGRTAIIIDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG
MRVVIELKRGEVAEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKAAPTPPVAKSELMARAWDSSMV
REMLARTGDEVGGVEAFRPENLPKHYGIQTDGLYKLSDDQAQEILQMRLQRLTGLEQDKI
VNEYKDVMAQIADLLDILAKPERVTVIITDEMTAAKNEYGIGNKDERRSQIELNPTDLGT
EDLITPQDMVVTLSHTGYMKSQPVSEYRAQKRGGRGKQAMATKEDDWIDQLFVGNTHDYI
LCFSNRGRLYWLKIWELPQGSRNSRGKPIVNMFPLQDGEKITVVLPLSGANRSFPEDRYV
FMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVRF
DENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRHG
RGTKGMIAIQTSERNGKVVAATLVEPSDEIILITTGGVLIRTRVAEIREMGRATQGVTLI
AVEDGTKLSGLQRVVESDAEVDVAEATDAADATGTDAETGGNTEAGDAPDASTE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgctaaagaaacaatcccgatttccctcgaagaagaaatgcgcaagagc
tatctcgattacgccatgagcgtgatcgtcggccgtgcattgccggatgtgcgcgacggc
ctcaagccggtgcaccgccgggtcttgttcgcgatgcatgaaatgaacaatgtctggaat
cgcccgttcgtcaaatgcgcgcgcgtggtcggtgaaaccatgggtaaataccacccgcac
ggcgacgcctcgatttacgacacgctggtgcggatggcgcagccgttttcgctgcgttat
atgctggtcgacggccaaggcaacttcggctcgatcgatggcgacggcgcggcagcgatg
cgttacaccgagtgccgcctcgacaagatcgccggcgaactgctggccgacctcgacaag
gaaaccgtcgatttcgtgccgaactacgacggcaaggaaaaagagccatcggtattgccg
acccgtattcccaacctgctgatcaacggttcgtccgggatcgcggtgggtatggcgacc
aacattccgccgcacaacctgacagaagtgatcgatggcgcgctgcacgtgttgcgcaac
gccgattgcacgatcgacgagctgatcgaaatcatcccggcgccggacttcccgaccgcc
ggcatcatttacggcgtgtccggtgtacgcgatggttaccgcaccggccgtggtcgcgtg
gtgatgcgcgccaagacccacttcgaagaattcggacgtgaaggccgcaccgcgatcatc
atcgacgaactgccgtaccaggtaaacaagaaggcgctgctggaacgtatcgccgagctg
gtgcgtgacaagaagctggaaggtatttccgacctgcgcgacgaatcggacaagtccggc
atgcgtgtggtgatcgagctcaagcgcggcgaagtggccgaagtggtgctcaacaacctg
tacaagcaaacgcagctgcaagacacgttcggcatgaacatggtggcgctggtggatggc
cagcctaagttgctgaacctgaagcagatgttggaatgcttcctgtcgcatcgtcgtgaa
gtggtgacgcgccgtaccgtgttcgaattgcgcaaggcgcgcgaacgcggccacgtgctg
gaaggtctggcggtagcgctggcgaacatcgatgatttcatcgcgctgatcaaggctgcg
ccgacgccgccggtcgcgaaatccgaactgatggcgcgcgcctgggattcttccatggtg
cgcgaaatgctggctcgtactggcgacgaagttggtggcgtcgaagccttccgtccggaa
aacctgcctaagcattacggcatccagactgacggtttgtacaagctgtcggatgaccag
gcgcaggaaatcctgcagatgcgtttgcaacgcctgactggtctggaacaagacaagatc
gtcaacgaatacaaagacgtgatggcgcagatcgccgatttgctggacatcctggccaag
ccggaacgcgtcaccgtcatcatcactgatgaaatgaccgctgccaagaacgaatacggc
atcggcaacaaagatgaacgtcgttcgcaaatcgaattgaatccgaccgacctgggtacg
gaagacttgatcacgccccaagacatggttgtgaccttgtcacacaccggctacatgaag
tcgcagcctgtgtccgaataccgcgcgcaaaaacgtggcggtcgcggcaagcaagcgatg
gcgaccaaagaagatgactggatcgaccagctgttcgtcggcaatacccatgattacatc
ttgtgctttagtaatcgcggccgcctgtactggctgaagatctgggaactcccgcagggc
tcgcgcaattcgcgcggcaagccgatcgtcaatatgttcccgctgcaggacggcgaaaaa
atcaccgtggtattgccattgtccggcgccaaccgctcgttccctgaagaccgttatgtc
ttcatgtcgaccagcctcggtaccgtcaagaagacgccgttgtccgactttagcaaccca
cgcaaggctggcattatcgcggtcgatctggatgaaggtgatttcctgatcggcgccgcg
ctgaccgacggccagcatgacgtgatgctgttctccgattccggcaaggcagtgcgcttc
gatgaaaacgatgtgcgtccgatgggtcgtactgcacgtggcgtgcgcggcatgaacctg
gaagagggccaacaggtcatcgctttgctggtcgcggaaaacgaacagcaatcggtattg
acggcgactgaaaatggcttcggaaaacgtactccgatcaccgagtacacccgccatggc
cgcggcaccaagggcatgatcgcgatccagaccagcgagcgcaacggcaaggttgttgca
gcgacgctggttgagcctagcgacgagatcatcctgatcaccactggtggcgtcctgatc
cgtacccgtgttgcggagattcgtgaaatgggccgcgccacccaaggcgtgacgctgatc
gcggtggaagacggcaccaagctgagcggtttgcagcgtgtggtcgaatccgatgccgaa
gtcgacgtggctgaagcaacggacgctgcggatgcgaccggtaccgatgctgaaacaggc
ggcaacaccgaagcaggtgatgctcccgacgcgtcgacagagtaa
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