Collimonas arenae: LT85_4442
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Entry
LT85_4442 CDS
T03512
Name
(GenBank) Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
care
Collimonas arenae
Pathway
care03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LT85_4442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
care03019
]
LT85_4442
Messenger RNA biogenesis [BR:
care03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LT85_4442
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AIY43600
UniProt:
A0A0A1FIR3
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All DBs
Position
4985414..4985989
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AA seq
191 aa
AA seq
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MLDREGFRPNVGIILLNTQNEVWWGKRVREHSWQFPQGGIKYGETPEQAMFRELEEEIGL
KAEHVKIIGRTRDWLRYEVPDHFIKRDVRGHYRGQKQIWFLLRMTGRDCDVNLRLTEHPE
FDAWRWHDYWVPLDVVIEFKRDVYQRALQELSRFLTRPLQNTPHHARHLRTGHGPRASTQ
STPAIAEPEKK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgaaggctttcgcccgaacgtcggcattatcttgctcaatacccagaat
gaagtctggtggggcaagcgcgtgcgcgaacactcgtggcaatttccacagggcggtatc
aaatacggggaaaccccggagcaggctatgtttcgcgaactcgaggaagaaatcgggttg
aaagcggaacacgtcaagatcatcggccgcacccgcgactggctgcgctatgaagttcct
gatcatttcatcaagcgtgacgtacgtgggcattatcgcggtcaaaagcagatctggttc
ctgcttcgcatgaccggacgcgactgcgacgtcaacctgcgcctgaccgaacatccggaa
ttcgacgcctggcgctggcatgactactgggtgccgctggatgtcgtgattgagttcaag
cgcgatgtctatcaacgcgcattgcaagaattatcacgttttctgacacggccattacaa
aataccccgcatcacgcccgtcatttgcgcaccggccatgggccgcgtgcatcgacgcaa
tccacaccggctattgccgaacccgaaaaaaagtga
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