KEGG   Collimonas arenae: LT85_4604
Entry
LT85_4604         CDS       T03512                                 
Name
(GenBank) General secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
care  Collimonas arenae
Pathway
care03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:care00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LT85_4604
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:care02044]
    LT85_4604
Secretion system [BR:care02044]
 Type II secretion system
  General secretion pathway protein
   LT85_4604
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Pro_Al_protease
Other DBs
NCBI-ProteinID: AIY43762
UniProt: A0A0A1FLJ5
LinkDB
Position
complement(5162152..5164494)
AA seq 780 aa
MYLAPFNNTANKIASTFETPHLQMALRGSWRYAAAIALLTCAAGIPVVATAQPVLGTAPA
GATTDGPSGQAVMNFVGADIESVIKAVGQYTNTTFIVDPRVKGTINLVSEKPLSKAQAFD
LLASTLRLQGYAVVRGDGFVKVVPEADAKLQVAPTRPASVRGDQIATQIFSLNYESATNI
LPVLRPLISPNNTINANPGNNTLVVTDYAENLQRLGKMIAALDVPAINDLDVIPVRYAVA
SDIAVMASKLLDSGSAAPGASDSARTMIMADSRTNSVVIRAPSAGRANLAKSLIAKLDQP
TANAGNVHVVYLKNADAVKLAKTLRAIVSNDTSLPSSSQSSKSSSSSGSMLQGSGSGGAL
NSGTSTTPSPPSTDTSPQSSGGSGGGAAGFIQADESTNTLIITASEPVYRNIRGVIDQLD
TRRAQVYVEALIVEVTDSAASEIGVQWLALSGDKNSAYRIGGGTGFTGTNTGLINSNLFN
TAIGQTVNTGTTTTVPSVGSGLQLGIFRQIAGKIGLGALASALNSTTGSNVLSMPNLLTL
DNEEAKIIVGQNVPFVSGSTLTTGAGTTSPFTTIDRKDVGTALKIKPHISEGGTVRLEIS
QEVSAVVTGTANNTNGPITTKRSLDTNVVIDDGEIIALGGLIGDNNQSGVQKVPLLGDLP
FIGNFFKYQTGSREKTNLMIFLRPVIVRDKETSNLLAVDRYDYMRKQQIKVQPGKSILTD
FGSSVTSKLEDGGPFIDLRKQESAPNSPHQPAPEQEQMPMLVPAKPQVSPAPGFLNDRTP
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgtatctcgcaccattcaacaacactgcgaacaagattgcatcgacattcgagacacct
catttgcagatggcgttgcgcggttcgtggcgctacgctgctgccatcgccttgctgacc
tgcgcggccggtatcccggtggttgccacggcgcaaccggtgttgggcacagctccggcc
ggcgccacgaccgatggccccagcggccaggcagtgatgaattttgtcggtgcagatatc
gagtcggtgatcaaggcggtcggccaatataccaacaccaccttcatcgtcgatccgcgc
gtcaagggcaccatcaacctggtatcggaaaagccgctgagcaaagcgcaggcttttgat
ttgctggcatcaaccttgcgcctgcaaggctacgcggtggtgcgcggcgacggttttgtc
aaagtcgtgccggaagcggacgccaagctgcaagtggcgccaaccaggccggccagcgtg
cgcggggaccagatcgcaacgcagattttctcgttgaactacgagtcggcaaccaacatc
ctgccggtgctgcggccgctgatttcaccaaacaacacgatcaatgccaacccgggcaac
aacaccttggttgtcaccgactacgcagaaaatttacagcgccttggaaaaatgatcgcc
gcgctggacgtgcctgcgatcaatgacctggatgtcatcccggttcgttatgcggtggcc
agcgatatcgcagtaatggctagcaaactgctggattccggttccgctgcacctggcgcc
agcgatagcgcgcgtaccatgatcatggcggattcgaggaccaactcggtggtgattcgg
gcgccatctgcaggtcgggccaacctggccaagtcgcttattgccaagctggaccagccg
actgccaacgctggcaatgtccatgtggtctatctgaaaaacgccgacgcggtgaagctg
gctaaaaccttgcgtgcgatagtttccaatgatacgtcgttgcctagttccagccagtcc
agcaagagttccagcagttcgggcagcatgttgcaaggttcaggtagtgggggggcgctg
aattccgggacgtcgactacgccatcgcccccatcgaccgatacatctccgcaatcttca
ggtggcagcggtggcggcgctgccggatttatccaggccgacgaaagtaccaacacgctg
atcattactgccagcgagccggtctatcgcaatatccggggagttattgatcagctcgac
acgcgccgggcgcaggtgtatgtggaagcgttgattgtcgaagtcaccgacagcgccgcc
agcgagatcggagtgcagtggctggcattaagcggcgataaaaacagcgcctaccggatc
ggtggcggtactggatttaccggcactaatactggcctgattaatagcaatctgttcaat
acggcgattggtcaaacggtaaataccgggactaccactaccgtgccgagtgttggcagt
ggtttgcagcttggcatattccgtcagatcgccggcaaaatcggcttgggtgctttagcc
agcgccttgaactcgactactggcagcaatgttttgtccatgcctaacctgctgacgctg
gacaatgaggaagctaagattatcgttggtcagaacgtgccgtttgtgtcgggctcgacc
ttgaccactggcgccggcaccaccagcccgtttaccaccatcgaccgcaaagacgtcggc
accgcgttgaaaatcaagccacatatttcggaaggcggtacggtgcggctggaaatttcg
caagaagtgtctgcggtcgtcaccggcacggcgaacaacactaacggaccgattacaacc
aagcgttccttggataccaatgtggtgatcgacgatggtgagatcattgcgctcggcggt
ttgattggcgacaacaaccaaagcggggtgcaaaaagtacctttactgggcgatctgccc
tttatcggcaatttcttcaaataccagaccggctcgcgcgagaagactaatctgatgatt
ttcctgcgcccggtgattgtgcgcgacaaggagaccagtaatttgctggcagtggaccgt
tacgactacatgcgcaagcaacagatcaaggtgcagccaggtaagagcattcttaccgat
tttggctcatctgtgaccagcaaactggaagacggtggaccattcattgacctgcgcaag
caagaatccgcaccgaattcgcctcatcaacctgccccggaacaggagcaaatgccgatg
ctggtcccggcgaaaccacaggtctcgccggcccctggttttctgaatgacagaacgcca
tga

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