Collimonas arenae: LT85_4632
Help
Entry
LT85_4632 CDS
T03512
Name
(GenBank) transcriptional regulator
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_4632
Transcription factors [BR:
care03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LT85_4632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
FeoB_N
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AIY43790
UniProt:
A0A0A1FJB4
LinkDB
All DBs
Position
5188956..5189708
Genome browser
AA seq
250 aa
AA seq
DB search
MNHAPLHAAPLLDIRALRSSCSSCSMHQLCLPMGLDESEMQRLDGIIGRRRIARDETLYR
IGDKFSALYAVRVGQFKTSQANPDGAQQITGFQMSGELLGMDAISTDTHQCDAMALEDSE
ICEIPFVRLEELFGDIPTLLRHFHRIMSKEITREQSVILLLGNMRAEQRFAAFLVNLSSR
YAARGYSSTSFQLRMTREDIGNYLGLTIESISRLLSKLKKDGMLKVSNREIELVDLPALK
RLATGGETCA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgctcccctccacgcagcgccgctgctggacatcagggccctgcgctccagc
tgttcgtcttgcagcatgcaccagctatgcctgccgatggggctggatgagtccgagatg
cagcgcctggacggcattatcggccgccgccgcatcgcgcgcgatgaaaccttgtatcgt
atcggcgacaaattcagcgctttgtatgcggtacgggtgggccagttcaaaacctcacaa
gccaatcccgacggcgcccagcaaatcaccggcttccagatgagcggcgaattgctcggc
atggatgcgatcagcaccgatacccatcaatgcgatgcgatggcattggaagatagcgaa
atctgtgaaattccattcgtgcggctcgaagaactgttcggcgacatccctactttgctg
cggcacttccatcgcatcatgagcaaggaaatcacacgcgaacaaagcgtcattctgctg
cttgggaacatgcgcgccgaacagcgctttgccgcgttcctggtcaacctgtcgtcgcgc
tacgcggcgcgcggctattcttcgaccagtttccagctgcgcatgacgcgcgaagatatc
ggcaactatcttggcctgacgattgaaagcatcagtcgcctgctgtccaaactcaagaaa
gacgggatgctgaaagtcagcaaccgggaaatcgaacttgtcgacttgccggcgttgaaa
agactggcgaccggcggcgagacctgcgcctga
DBGET
integrated database retrieval system
