Collimonas arenae: LT85_4682
Help
Entry
LT85_4682 CDS
T03512
Name
(GenBank) Rare lipoprotein A precursor
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
care01011
]
LT85_4682
Enzymes [BR:
care01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LT85_4682
Peptidoglycan biosynthesis and degradation proteins [BR:
care01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LT85_4682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AIY43840
UniProt:
A0A0A1FJF1
LinkDB
All DBs
Position
complement(5241495..5242622)
Genome browser
AA seq
375 aa
AA seq
DB search
MVGKQGAKRHGKVSTRYGIAANASALLVALILAGCGSSPKAPSASSAPTKTASSGRGGPT
LPAAGSGRGGYYKDDGPGDVTPEGLLDVPDAIPTIEPYSRTGNKPYVVFGKTYTPLTDDQ
PFKQRGIGSWYGKKFHNQKTSSGELYDMYKMTAAHPTLPIPSYARVTNLKTGAQVIVRVN
DRGPFHSSRIIDLSYTAALKLGYLGSGSGQLEVERLLPADIIAMNKQRQNGTLAATTQAA
PPQAQIEPVRDSVAPATVVTESVDMPVLTAQPLLFDPTPSAAPSVAPVAAQGDNNSASAA
GFYVQFGAYSQQANADGARTRLMQELNGVVNSLSSVAVNGLYRLYAGPYASRSDADSVLQ
QIRQRTSVNPIVVQR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcaagcagggcgcaaagcgtcacggtaaagtgagtacccgctacggtattgcg
gccaatgccagcgcattgctggtggcgctgatactggccggatgcggctcgtcaccgaaa
gcgccttcagcttcctctgctccaaccaagactgcatccagtggacgtggcggaccaacg
ttgcccgcggcaggctccggccgcggcggctactacaaggatgacggtccgggcgatgtc
acgccagaagggctgttggacgtccctgatgcgattcccaccatcgaaccttattcgcgc
accggcaacaagccttatgtcgtatttggcaagacctacacgccgctgaccgacgaccag
ccgttcaagcagcgtggcatcggcagctggtacggtaaaaaattccataatcaaaagaca
tcttccggcgaactgtacgacatgtacaagatgaccgccgcccatccgaccttgccgatt
ccgtcctatgcacgggtgaccaacctgaaaaccggcgcccaagtgattgtgcgggtcaat
gaccgcggaccgtttcattccagccgcattatcgatctgtcttacaccgcggcgctgaag
cttggctacctcggcagcggcagcggccagctggaagtggagcgcttgctgccggcggat
atcatcgcgatgaacaagcagcgtcagaatggtaccttggcggcaaccacgcaagcagcg
ccgccgcaagcgcagattgagcctgtcagagacagcgtcgcaccggcgacggtggtcacc
gaatccgtggacatgccggtgctgacggcgcaaccgctactgttcgatccaacgccgtct
gcagcgccaagcgttgctccagttgcagcgcagggcgataacaacagtgcatccgccgcc
ggcttctatgtacagttcggcgcctattcccagcaagccaatgccgacggcgcccgcacg
cgtctcatgcaagagttgaacggcgtcgtcaattcgctcagcagcgttgccgtcaatggc
ttgtatcgcttatatgccgggccttatgccagccgctccgacgccgacagcgtcctgcaa
cagatccgccagcgcaccagcgtcaatccgatcgtggtgcaacgctag
DBGET
integrated database retrieval system
