Collimonas arenae: LT85_4711
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Entry
LT85_4711 CDS
T03512
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
care03009
]
LT85_4711
Ribosome biogenesis [BR:
care03009
]
Prokaryotic type
ribosomal protein modification factors
LT85_4711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AIY43869
UniProt:
A0A0A1FJN7
LinkDB
All DBs
Position
5274748..5276952
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AA seq
734 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISDKDRQGILRSIERCTVKKVVQA
GPEFVIEEVENLDADAQSLLTLKPGSDVSTYIAGKDLPLEQTIANMSGVLANLGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLNCNHFYAGTFWGED
IANAAFVHYPNERWFKPGPKDALPAEILDEYCLQIYNPDGELYGSHLVDTNSGNEQRGIC
SLPYVRQSDGKVVYFPSNLVENLYVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
TLPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNELPRPTFTSEAVTEPNNFVEHFIDSSGIVSWRF
FSAKADFNFVEWDFSGQGENSNIDEAAALFGILADMDKEVYMAAYDNLGAIACRILVPGY
SEIYPIDDLIWDNTNKALLFRADILNLHRLDDASLEALLERLDNNELDEYSDIATLIGIE
FDENTDWGQLTVLELKLLINLALQQFEAAQDLVGAFLQYNDNTAERGMFYQALNVVLEVL
LDDDLELDDYLVNFRRMFGNARMDAVMGSVDGSVRFFGLTPTSMKLEGLDRHQRLIDSYK
KLHKARGNVAVTSR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgataagctacgtcttgaagccaagttcgatgacttc
acggtagtggccgaccagcctatccgctataagggcgatggctcggcgcctggtcccttc
gattattttctggcctcatcggccttgtgcgcagcttactttgtgaagttgtattgcgta
actcgcaatattcctaccgaaaatatccgtctgtcgcagaataatattgttgatccggaa
aaccgctaccagcagattttcaagattcaggttgagttgccggcggatatctccgacaaa
gaccgccagggtatcttgcgctccatcgagcgttgtacggtgaaaaaagtggtgcaggcc
ggacccgagtttgtcattgaagaggtagagaacttagatgccgatgctcagtcgttgctg
acgttgaagccgggttctgacgtcagtacctatattgcgggcaaggatctgccgttggaa
caaaccatcgccaatatgtcgggcgttttggcgaacctgggcatcaagattgaaatcgct
tcgtggcgcaatcttgttcccaatgtgtggtcgctgcatatccgcgatgcacactcgccg
atgtgttttaccaatggcaagggggcgaccaaagaaagcgcgttggcgtcggcgttggga
gagtatatcgaacgactgaattgcaaccatttctacgccggcacgttttggggcgaagac
atcgccaacgcggcgtttgtacattacccgaacgagcgctggtttaagcctggcccgaaa
gatgcgctgccggctgaaattctggatgagtactgtctgcaaatttacaatcccgacggc
gagttatatggctcgcatctggtcgacaccaactccggcaatgagcagcgcggtatctgt
tcgctgccgtatgtgcgacagtcggacggcaaggtggtgtatttcccctccaacctggtc
gaaaacctgtacgtcagcaacggcatgagtgctggtaacacgctggccgaagcgcaggtg
caatgcctgtcggagattttcgaaagggctgtaaaacgcgaaattctggaaggtgaaatc
acattgcctgatgtgccgcaggaagtgctggcgaaatacccaggcattctggccggcatt
cagggcttggaagagcaaggctttccggtgctggtgaaggatgcgtcactgggaggggtg
tatccggtgatgtgcgtcaccttgatgaacccgcggacaggcggcgtgtttgcgtcgttc
ggcgcgcacccaagcctggaggtggcgctggagcgcagtctgacggaattgctgcagggc
cgcagttttgaaggcctgaacgaattacctcggcccacctttacaagtgaagccgtgacc
gagcccaataactttgtggagcacttcatcgattccagcggtattgtgtcatggcgcttt
ttcagcgccaaagcggatttcaattttgtcgaatgggatttttccggccagggtgaaaat
tccaatatcgacgaagcagcggccttgttcggtattctcgcagacatggacaaagaggtg
tacatggcggcgtatgacaatttaggcgccatagcctgccgaattttggtacccggttat
tcggaaatttacccgatagacgatttgatctgggataacaccaacaaggccctgttgttc
cgcgccgatatcttgaatctgcatcgcctggacgatgccagcctggaagcgctgcttgag
cgtctggataacaatgaactcgatgaatattccgacatcgccacactgatcggtattgaa
tttgacgagaatacggattggggccaattaacagttctcgagttgaaactgctgatcaat
ctcgccttacagcaatttgaggcggcgcaagatctggtgggagccttcctgcagtacaac
gacaacacggccgagcgcggcatgttttatcaggccttgaatgtggtgctagaggtactg
ctggatgacgacttggaactggacgattacctagtcaatttccgccggatgtttggcaac
gcccggatggacgcggtaatggggtcagtggatggcagcgtgcgcttcttcgggttaacg
ccaacgagcatgaaactggagggtctcgataggcaccagcgtctgatcgacagctacaaa
aaattgcataaggctcggggtaatgtggcggttacatcccgttag
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