Collimonas arenae: LT85_4798
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Entry
LT85_4798 CDS
T03512
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
care
Collimonas arenae
Pathway
care00550
Peptidoglycan biosynthesis
care01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT85_4798
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
care01002
]
LT85_4798
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
care01011
]
LT85_4798
Enzymes [BR:
care01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LT85_4798
Peptidases and inhibitors [BR:
care01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LT85_4798
Peptidoglycan biosynthesis and degradation proteins [BR:
care01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LT85_4798
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AIY43956
UniProt:
A0A0A1FH96
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Position
5363591..5364847
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AA seq
418 aa
AA seq
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MLTASAYAFFQPIHANKIALYHYRCSFVGLDFITRYSMKKIFAALAATVLSISVAFAQTL
PSPTVAAKSWLLLDTTSNQVIASQDPDMRIEPASLAKIMTAYVVFEALRDKKVSLDQMVN
VSVRAWKVDPSSSKMFIDPATPVSINDLLYGLMVVSGNDAAVALAEAVAGTEDSFVALMN
HEAERMGMKNTHFGNPHGLPSADTYSTARDLANLAARVTIDFPEFYKIDSTKKYTYNKIT
QPNRNRLLWSDPTVDGMKTGHTSSAGYSIIASAKRPNAGGDRRLMAVVIGTNSDGTRTQE
AQKLLNWGFQNFDTVKLYAKDQAVDTPQVWKGAKSQVKIGFTHDVYVTVPKGITDKIKPV
LERTDPLIAPIQQNAKVGTVKVNADGKTIAEFPVVALENVGQATIFGRAWDSIRLMFK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttgctcaccgcctccgcttacgcattttttcaacccattcacgccaataaaattgctctt
tatcactatagatgtagttttgtcggccttgatttcattactagatattccatgaaaaaa
atattcgcggcgctcgctgcaactgtcctctccatatccgttgcctttgcccagaccctg
ccctcgccgacagtggccgccaaatcatggctgttgctggacaccaccagcaaccaggtg
atcgcgtcgcaagacccggacatgcgtatcgaaccggcttcgctggccaagatcatgacc
gcttacgtcgtcttcgaagccctcagggacaagaaggtcagcctcgaccagatggtcaac
gtctcggtgcgtgcctggaaagtcgacccgagcagctcgaaaatgtttatcgatccagcc
acgccggtatcgatcaacgacctgctgtacggtctgatggtggtatcgggtaacgacgcc
gctgttgcattggccgaagccgtggctggtaccgaagactccttcgtcgcgctgatgaac
cacgaagcagagcgcatgggcatgaaaaacacgcatttcggcaatccgcacggcttgcct
agcgcggacacctactccactgcacgcgacctggctaacctggcggcgcgcgtgaccatc
gatttccctgagttctacaagatcgactcgaccaagaaatacacttacaacaagatcacc
cagcctaaccgcaaccgcctgctgtggagcgatccgaccgtcgacggcatgaagaccggc
cacaccagcagcgccggctactccatcatcgccagcgccaagcgccctaatgcaggcggc
gaccgccgcttgatggcagtcgtgatcggcaccaattccgacggcactcgtacccaggaa
gcgcaaaagctgttgaactggggcttccagaacttcgacaccgtcaagctgtacgccaag
gaccaggcagtcgatacgccgcaagtctggaagggcgccaagagccaggtcaagatcggc
ttcacccacgacgtctatgtgaccgtaccgaagggcatcaccgacaagatcaagccggtg
ctggaacgcacagacccgctgatcgcgccgatccagcaaaacgccaaggttggcaccgtc
aaggtcaacgccgacggcaagacgattgccgaattcccggtagtggcgctggaaaacgtc
ggccaggccaccatcttcggccgcgcctgggattcgatccgtttgatgttcaagtaa
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