Collimonas arenae: LT85_4833
Help
Entry
LT85_4833 CDS
T03512
Name
(GenBank) Small-conductance mechanosensitive channel
KO
K03442
small conductance mechanosensitive channel
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_4833
Transporters [BR:
care02000
]
Other transporters
Pores ion channels [TC:
1
]
LT85_4833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
AIY43991
UniProt:
A0A0A1FHC5
LinkDB
All DBs
Position
complement(5403786..5404637)
Genome browser
AA seq
283 aa
AA seq
DB search
MNIQAVTQLSSMWSFLLESSLHYGLNAVLAIFTLAIGWWLSSRFANALDRVMIRASLDAT
LRPVLRSVLLWVVRLVTLVAVLGQFGVQTASIVAILGAAGLAIGLALQGTLQNIAAGMML
LFLRPFQVSEYISNGSIEGTVDEIGLFATKLTKADGICLFVPNNQLWNSALTNYSRNNTR
RIDMPISINFKDNPAVAIAALEKLLLADERILATPAPLVVVTDYAESAVMLNMRGWTTTS
EYWAVRWSLAQNVQAALTAVNCSIPFPTRELVVTHEAQTRIAG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatacaagccgtcacccaactgagttccatgtggagctttcttcttgaatcatcc
ttgcattacggcttgaacgccgtactcgctatttttacgctggccatcggttggtggcta
tcgtcgcgtttcgccaatgcgctcgaccgtgtcatgatccgcgccagcctcgacgccacc
ttgcgtccggtgctgcgcagcgtgctgctgtgggtggtgcggctggtgacgctggtcgcc
gtactgggacaattcggggtgcagaccgccagtatcgtcgccatcctcggcgctgccggc
ctggccatcggcctggccttgcagggcactttgcaaaatatcgcagctggcatgatgctg
ctgttcttgcggccgttccaggttagcgaatacatatccaacggcagcattgaaggcacg
gtcgatgaaatcggcctgtttgccaccaagctgaccaaggctgacggcatctgcctgttc
gtgccgaataaccaattgtggaacagcgcgttgaccaactacagccgcaacaatacgcgt
cgcatcgacatgccgattagcatcaacttcaaggataatccagcggtcgcgatcgccgcc
ttggaaaaactgttgctggcggacgaacggatcctggcaacgccggcgccgctggtggta
gtgaccgattacgccgagagcgctgtgatgctgaacatgcgcggctggaccactacctcc
gaatactgggcggtgcgctggtcgctggcacaaaacgtgcaagctgctttgacggcagtg
aattgttcgattccgtttcctacgcgtgagttggtggtcacgcatgaggcgcaaaccagg
attgccggttaa
DBGET
integrated database retrieval system
